Coprococcus comes: I6K69_06130
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Entry
I6K69_06130 CDS
T07118
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ccom
Coprococcus comes
Pathway
ccom03420
Nucleotide excision repair
ccom03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
I6K69_06130
03430 Mismatch repair
I6K69_06130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccom03400
]
I6K69_06130
Enzymes [BR:
ccom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I6K69_06130
DNA repair and recombination proteins [BR:
ccom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I6K69_06130
MMR (mismatch excision repair)
Other MMR factors
I6K69_06130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_11
Viral_helicase1
AAA_16
DEAD
AAA_25
ResIII
HTH_38
Herpes_ori_bp
AAA_7
PhoH
Motif
Other DBs
NCBI-ProteinID:
QRT51293
LinkDB
All DBs
Position
complement(1249978..1251759)
Genome browser
AA seq
593 aa
AA seq
DB search
MNNIEEIKTLNSYQQEAVLDESPACLVNANVGSGKTTVLIEKVRHLHEKKQVSYEKMAVL
TFTNKAADEIAERLSRKEAELTEEELWGFGTFHSVALRILRRFLPEKAEDGTKLEEWNRE
FTVITPEDEMEMVLAIAKEGGYKIKYQNRLKKRMEEDYAAYRKGRTQGKYKDDLFRVFPL
LEKAKRQQNKMSFADLLEEGTQVAKEQEEVLDLKWIIVDEVQDSDEKQLKFLEALKGTQT
HFFAVGDPNQVIYSWRGTGPNMFFLIKHRFGAKELTLPVNYRSDEVILEAANRFLQFGGK
IEGSGERGEKILVRNHYDPFIEAEYLTERIRELHEQGLPYREIAVFYRVQKQAEILEKVF
ERAELPYVLPTKQKEDEDPVPERPHMIREYVAEGKLNAVSGEHTMEKAADTERQTEEEDA
VHLMTLHASKGLEFDYVFIIGMNQGLIPLRCKSIEQEEEERRLFFVGLTRARKNLELSYY
TNPTIPGTYETPSNYLRMLPEELLDWEEKPGSESRKANLQKLRKDTRELIREKKQEEEEQ
KETRKPERKGRHPKYGEGEIISEDEMMIELEFPGYGKKQFLKAFGEVEVLKGL
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgaataatatagaagaaataaaaactttaaattcttaccagcaggaggcggtgctggat
gaaagcccggcatgtctggtaaatgcaaatgtagggagcggaaagacaacagtgctgatc
gagaaagtgcggcatctgcatgagaaaaagcaggtttcgtatgagaaaatggcagtgctt
acctttaccaataaggcggcagatgagatcgcagaacgtctatccagaaaagaagcagag
cttacggaagaagaactgtggggatttggaacctttcacagtgttgccttaaggattctg
cgaagatttcttccggaaaaggcagaagacggaacaaaattggaagaatggaaccgggaa
tttaccgttatcacaccggaagatgaaatggaaatggtgcttgccatcgcaaaagaaggc
ggttataagatcaaataccagaaccgtctgaaaaagcggatggaagaggattacgcggca
tatcggaaaggaagaacacagggaaaatacaaagatgatctgtttcgggtctttccgctt
cttgagaaggcaaaaagacagcagaataaaatgtcctttgcagatcttctggaagaagga
acgcaggtggcaaaagagcaggaagaggtgctggatcttaagtggatcattgtcgatgag
gtacaggacagtgacgaaaaacagctgaaatttctggaggcgttaaaaggcacacagacc
cacttttttgcggtgggggatccgaatcaggtgatctacagctggagaggaaccggaccg
aatatgttcttcctgatcaagcacagatttggcgcaaaagaactgactctgccggttaac
taccggtccgatgaagtgatcctggaagcggcgaaccgttttcttcagtttggaggaaag
attgagggaagtggcgaaagaggggagaagattctggtaaggaatcattatgatccattt
atcgaggcagagtatctgacagagcggatccgtgagcttcatgagcagggacttccttac
cgggagattgcggttttctaccgggtgcagaagcaggcagagattctggaaaaagtattt
gaaagagcagaacttccttatgttcttccgacaaaacagaaagaggatgaggatccggtt
ccggaaagacctcatatgatccgggagtatgttgcagaagggaaactgaatgcggtttcg
ggcgaacatacgatggaaaaagcggcagatacagaacgacagacggaggaagaagacgca
gttcatcttatgacactgcacgcctcaaaaggtctggaatttgactatgtattcatcatt
ggaatgaatcagggactgatcccgcttcgctgcaaaagcatagaacaggaagaagaggag
cgccgtctgttcttcgtaggactgacccgtgcaaggaagaatctggaactttcctattat
acaaatccgacgatcccggggacatatgagacaccaagcaattatctgcggatgctgccg
gaggagctgctcgactgggaagaaaagccgggaagtgagtcgcggaaagcgaatctgcag
aaactgcggaaagatacgcgggagctgatcagggagaaaaagcaggaggaagaagaacag
aaagaaacacggaagccagagcgaaaaggcagacatccgaagtacggggaaggggagatt
atttctgaggacgagatgatgatcgaactggaatttccgggatatggaaaaaaacaattt
ctgaaagcatttggcgaagtggaagttttgaaaggcttatag
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