Coprococcus comes: I6K69_08615
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Entry
I6K69_08615 CDS
T07118
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
ccom
Coprococcus comes
Brite
KEGG Orthology (KO) [BR:
ccom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccom03019
]
I6K69_08615
Messenger RNA biogenesis [BR:
ccom03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
I6K69_08615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Cas3_HD
HDOD
TraI_2
Motif
Other DBs
NCBI-ProteinID:
QRT48398
LinkDB
All DBs
Position
complement(1768222..1769163)
Genome browser
AA seq
313 aa
AA seq
DB search
MRYIETLHEGETIRNTYLCKGKRSAETRNGKPYDNLILQDKTGTLDGKIWDPNSNGIADY
SEKDFIEVYGEIISYNGNLQMNIKQLRVADEGEYDPADYMPTSEKSVDGMYEELMRYGKQ
VKNPYLQQVIRYYFVNDEQFIKSFKAHSAAKSVHHGFAGGLLEHTLSVVKFCEYMAGAYP
ILNKDLLYTAAMCHDIGKTQELSLFPDNDYTDDGQLLGHIVIGVEMLDDAIREIPDFPKK
LASELKHCIVAHHGELEYGSPKKPALAEAMALNCADNADAKMQTLTEIFKAKDTKDWLGY
NRLFESNLRKTSI
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgagatatattgagacattacacgaaggcgagacaatcagaaatacgtatctttgcaaa
gggaaaagaagtgcggagacaaggaacggaaaaccatatgacaacctgatccttcaggac
aagacaggaactttagatggaaagatctgggatccgaattcaaatggaattgcagattac
agcgaaaaagattttattgaagtttacggggagatcatcagctataacggcaatcttcag
atgaacatcaagcagctccgtgtagcagacgagggagaatacgatccggcggattatatg
ccgaccagcgagaaaagtgtggatggaatgtatgaagaactgatgcgttatggaaagcag
gtgaagaacccgtatctgcagcaggtgatccggtattattttgtaaatgatgaacagttt
atcaagagcttcaaggcacattctgcagcaaagagtgtacatcacggatttgccggagga
cttctggagcacacattaagcgtagtgaaattctgtgaatatatggcaggggcatatccg
atcctgaataaggatcttctgtatacagcggcaatgtgtcatgatatcggaaagacacag
gaactttccctgttcccggataatgattataccgatgatgggcagctgctcggtcatatt
gtgatcggtgtggaaatgctggatgatgcaattcgtgagatcccggattttccaaagaag
cttgccagcgaattaaagcactgtatcgtagcgcatcacggagaactcgaatacggttcg
ccgaagaaaccggcgcttgctgaggcaatggcacttaattgtgcagataatgctgatgca
aagatgcagacactgacagagatttttaaggcaaaagatacaaaggactggttaggttat
aaccgtctgtttgaatctaacttaagaaagaccagtatctaa
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