Coprococcus comes: I6K69_08770
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Entry
I6K69_08770 CDS
T07118
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ccom
Coprococcus comes
Pathway
ccom03030
DNA replication
ccom03430
Mismatch repair
ccom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I6K69_08770
03430 Mismatch repair
I6K69_08770
03440 Homologous recombination
I6K69_08770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccom03032
]
I6K69_08770
03400 DNA repair and recombination proteins [BR:
ccom03400
]
I6K69_08770
Enzymes [BR:
ccom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I6K69_08770
DNA replication proteins [BR:
ccom03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I6K69_08770
DNA repair and recombination proteins [BR:
ccom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I6K69_08770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
HHH_3
tRNA_anti_2
DUF3013
T2SSK
Motif
Other DBs
NCBI-ProteinID:
QRT48429
LinkDB
All DBs
Position
complement(1797865..1801344)
Genome browser
AA seq
1159 aa
AA seq
DB search
MNFAHLHVHTEYSLLDGSNKIKEYVARVKELGMTAAAITDHGVMYGVIDFYRAARAAGIN
PVLGCEVYVAPGSRFDKTAVGRDEDRYYHLVLLAENNTGYANLMKIVSRAFTEGYYYKPR
VDYELLETYHEGIIALSACLAGEVQRNLARGMYEEGKKAALHYEQIFGKGNFFLELQDHG
IPEQRTVNQQLMRLSQEIGIDLVATNDVHYTYAEDEKPHDILLCLQTGKKLADEDRMRYE
GGQYYVKSKEEMAALFPYAPEALENTQKIADRCHVEIEFGVTKLPKFDVPEGFTSWEYLN
KLCFDGLKRRYGEDPDPALVERLNYELGVIKSMGYVDYFLIVWDFIHFAKSNGIMVGPGR
GSAAGSIVAYTLAITNIDPIRYQLLFERFLNPERVSMPDIDVDFCFERRQEVIDYVVRKY
GKDRVVQIVTFGTLQARGVLRDVGRVMDLPYAFVDSIAKMIPKELNITLDKSLKMNHELK
KLYDEDPQVKELIDMSKRLEGLPRHTSMHAAGVVISQKDVDEYVPLALGADNNVVTQFTM
TTLEELGLLKMDFLGLRTLTVIQDAIRLVEKSTGVKLVTEKLNYNDKAVLDYIGTGKTDG
IFQIESAGMKSFMKELRPQSLEDIIAGISLYRPGPMDFIPQYIKGKNHPELITYECPQLK
PILAPTYGCIVYQEQVMQIVRDLAGYSLGRSDLVRRAMSKKKGDVMQRERQNFVYGNEEE
GIPGCVKNGIDEKVANKIYDEMIDFAKYAFNKSHAAAYAVVSYQTAYLKYYYPVEYMAAL
MTSVIDNPGKVAEYIYTCRQMGISILPPDINRGVGDFSVDNGNIRYGLAAIKGVGRPVIE
QIIRDREEHGTFRDLKDFLERLSGKEVNKRAVENFIKSGAFDSLKGTRKQFMIIYVQIMD
QVAQNKKNSLAGQMSLFDIVDDEQKKEFEVTLPDVGEYQKETMLAFEKEVLGVYISGHPL
EEYEEKWRKSISATTLDFQLDEETGRTKVRDGSREIIGGMITSKMIKYTKKNQTMAFITV
EDLLGTVEVVIFPQSYEKSQQYLQEDSKVFVRGRVSEEDDNASKLICEEVIPFDMTKKEL
WIQYADKQSYLQDEQNLFRMLAESEGEDQVVIFCKAERAVKRLPKNANIQVEPGILSRLT
NYFGEDCVKVIEKPIEMKG
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgcgcatttgcacgtccacacggaatacagccttctggacggttcgaataaa
attaaagaatatgttgccagagtcaaagaactggggatgacagcggctgcgatcacagac
cacggtgtcatgtatggcgtcattgacttctacagagccgcaagagcggcaggaatcaat
cctgtactgggatgtgaagtctatgtggcaccgggatccagattcgataaaacagccgta
ggacgcgatgaggaccgatattatcacctggtacttcttgccgagaataatacaggatac
gccaatctgatgaagatcgtgtcacgtgcatttacggaaggttactattataagccaaga
gtagattatgagcttctggagacctatcacgaaggaatcattgccctcagtgcatgtctt
gccggagaggtacagagaaacctggcgagagggatgtatgaagaaggaaaaaaagctgcg
cttcattatgaacagatttttgggaaaggcaactttttcctggaactgcaggatcatggg
atcccggaacagcgcaccgttaaccagcagttgatgcgtctgtcgcaggagattggaatc
gaccttgtggcgacaaatgacgtgcattatacttacgcagaagatgaaaagccacatgat
atcctgctttgccttcagacagggaaaaagctcgcagacgaggatcggatgcgctatgaa
ggcggacagtactacgtgaagtccaaagaagagatggcagcacttttcccatatgcaccg
gaggcgctggaaaatacacagaagattgcagacagatgccatgtagagattgaatttggt
gtgacaaagcttccgaaattcgatgtgccggaaggatttacctcatgggaatatttgaat
aagctctgttttgacggactaaaaagacgatatggagaagacccggatccagcccttgtg
gagcgcctgaattatgaattgggcgttatcaaaagcatgggttacgtggattacttcctt
attgtatgggatttcattcattttgcaaaaagcaacggaatcatggttggacctgggcgt
ggatctgcggcaggaagcattgtggcgtacacacttgcgatcaccaatatcgatccgatc
cggtatcagctgctgttcgagcgttttctgaatccggaacgtgtgtccatgcccgatatc
gacgtggacttctgctttgaaagaaggcaggaagtcattgattatgttgtgcgtaaatac
ggcaaagaccgggtagtgcagatcgtaacctttggtacactgcaggcgcgcggggtgctg
cgggatgtgggaagagttatggatcttccgtatgcttttgtggattcaattgcaaagatg
attccgaaagaactgaatattacactggataaatccctgaagatgaaccatgagctgaag
aagctctatgatgaagacccacaggtaaaagagctgatcgatatgtcaaagagactggaa
ggtctgccacggcatacatccatgcatgccgcgggagtcgtgatcagccagaaggatgtg
gatgaatatgttccgctggcacttggagcggacaacaatgtagtcacacagtttaccatg
accacgctggaagaactgggacttctgaaaatggatttccttggacttcgtaccctgacc
gtcatccaggatgcgatcagactggttgaaaaaagtaccggtgtgaagctggtaacagaa
aaattaaattataatgataaagcagtgcttgactatatcggaaccggcaagacggacggc
attttccagatagaaagtgcagggatgaagagcttcatgaaggaacttcgtccacagagt
ctggaagatattatcgccggaatttctctttaccggccaggtccgatggatttcattcca
cagtatatcaaaggaaagaaccatccggagctgattacttacgaatgcccgcagttaaag
ccgatcctggcaccgacctatggctgcattgtataccaggaacaggttatgcagattgtg
cgtgaccttgccggatattcacttgggcgaagcgaccttgtacgccgtgccatgagtaag
aaaaagggcgacgtgatgcagagagagcgtcagaattttgtatatggtaatgaagaagaa
ggcattccgggttgtgtcaaaaatggaatcgatgaaaaggttgcgaataagatctatgat
gaaatgatcgattttgcaaagtatgcgttcaacaaatcacatgcggcagcgtatgcggtt
gtctcataccagacagcgtatctgaaatattattatccggtagaatatatggcagcgctt
atgacttctgtcatcgacaatccgggaaaggttgccgaatacatttacacttgccgacag
atgggaatttctatcctgccgccggatatcaatcgtggggttggtgatttttctgtagat
aacggtaatatccgttacggacttgcggcgatcaagggggttggaagaccggtgatcgag
cagatcatccgggacagagaagagcatggcacgtttcgtgatctgaaggattttctggaa
cggctttccggtaaggaagtcaataaacgtgcggtagaaaactttatcaaatccggcgca
tttgacagtctgaaagggaccagaaagcagtttatgatcatttatgtacagatcatggat
caggtagcacagaacaagaaaaattcgcttgccggacagatgtcgctctttgatattgta
gatgacgaacagaaaaaagaatttgaggtcacgcttccggatgtgggagaataccagaag
gaaacgatgcttgcatttgaaaaagaagtactcggcgtgtatatcagcggacatccattg
gaagaatatgaagagaaatggcgcaagagtatttccgcaacgacattggattttcagctt
gatgaagagaccggacggacaaaagtacgtgacgggtcaagggagatcatcggtggtatg
atcacatcgaagatgatcaaatatacaaagaagaatcaaacgatggcatttattaccgta
gaggatcttcttggaacggtagaggttgtcattttcccgcagagctatgagaaaagccag
cagtatctgcaggaggacagcaaagtatttgtgcggggacgtgtatcggaagaagatgat
aatgcaagtaagctgatctgtgaagaggtgattccgtttgatatgacgaaaaaagaactg
tggatccagtatgccgacaaacagagttaccttcaagatgagcagaatctgttccggatg
ctcgcggaaagtgagggtgaggaccaggttgtaatcttctgcaaagcggagagagcggta
aaaagactgcctaaaaacgcaaatatccaggtagaacctggaattttgagcagattgacg
aattattttggagaagattgtgtaaaagtaatagaaaaacccattgaaatgaaggggtga
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