Coprococcus comes: I6K69_10885
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Entry
I6K69_10885 CDS
T07118
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ccom
Coprococcus comes
Pathway
ccom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
I6K69_10885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccom03400
]
I6K69_10885
Enzymes [BR:
ccom01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
I6K69_10885
DNA repair and recombination proteins [BR:
ccom03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
I6K69_10885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
UvrD_C_2
SH3_13
AAA_11
OB_YrrC
HHH_5
Viral_helicase1
HHH
UvrD-helicase
AAA_12
nSTAND3
PhoH
UvrD_C
T2SSE
AAA_28
AAA_22
AAA_18
SLFN-g3_helicase
AAA_16
HHH_2
AAA_23
ORC-CDC6-like
ABC_tran
DUF5457
Motif
Other DBs
NCBI-ProteinID:
QRT48785
LinkDB
All DBs
Position
2254085..2256322
Genome browser
AA seq
745 aa
AA seq
DB search
MRCRFKHKIFQNEENGYTIAIFTTQDTSVPLSARDKYLASRNIIGFSAIGFGLPLTDEIE
LEMEGRWESGEHGTQYQVENFMEVVPRTKEGILGYLSSGAIKGIGPKMADTIFRKFGLQT
LEIMEKNPQELLKIRGISEKKLAAIVESYGKNQVFRELMTFLAPFKVTPKKVNMILKKFG
NESVDIIRHRPYMLSAVKGFGFLTVDAIGRQCCCALNDPMRISGCIGHIMNQAMKEGHLF
KQRQEVIREALEMLNRDLQVMAVSEQDVSQVLYRLVLQKSIVVEEERIYSIRQYEEETQT
ASMIARRLLEKPVLLSIEPELEKAQKTLGITLSETQKQAVRMVFAHPISIITGGPGTGKT
TVLKVILYIHQALCRSEVQLMAPTGRAARRMVESTGCENASTMHLALGLLGDDTDFEPDF
EYLSAGFLNVDEVSMVDMHLAYEFFRRVSRHARVLLVGDKNQLPSVGAGDVFRQLIACGL
IPVTVLDLVYRQGALSSIPYNAKLMQENKTNLSFGEDFQFIACKGADEAAEIVRRIYLDE
IAKNGMDQVQILTPYRKRSAAGVDELNKSLEDFVNPPIAGKKELHIGSQVFRVGDKILQN
KNTEMASNGDLGRILDCITDEDGNARAVIGFPDGRQVQYEADQMEMIEHANATTIHKAQG
SECPVVIIPWVKAFYMMLKRNILYTGVTRAKSKVYLVGEWAAVCQAIHTDDSGTRNTILS
ERIVQYYDQYQSEQKPEMEQLKLVV
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgaggtgcagatttaaacataagattttccagaatgaggagaatgggtatacgattgcc
atattcaccacacaggatacgtctgtccccctgtcagccagagacaaatatctggcatcc
cggaatatcatcggcttctcagcgattggattcggtcttccgcttacagacgagattgag
cttgagatggaaggcagatgggagagcggagagcatggaactcagtatcaggtggaaaat
ttcatggaggttgtaccacggacaaaggagggtatcttaggatacctttcttccggtgca
atcaaaggtatcggtcccaagatggcagatactattttccggaagtttgggcttcagaca
ctggaaatcatggaaaaaaacccgcaggaactcttgaagatccgtggaatttccgagaag
aagctggctgctattgtggagtcctatggaaaaaaccaggtgttccgggaactgatgacg
tttctggcgccttttaaggtaacacccaaaaaagtgaatatgattctgaagaaattcgga
aatgaatcggtggatattatccggcaccgcccttacatgctgagtgcagtcaaaggcttc
gggtttctgactgtggatgcgatcggaagacagtgctgctgtgcactcaatgatcccatg
cggatatccgggtgcatcggacatatcatgaatcaggcaatgaaagaaggacatctgttt
aagcagcgtcaggaggttatcagggaagcactggaaatgctgaaccgggatctgcaggtc
atggcagtatcggagcaggatgtcagtcaggtgctttaccggctggtgctgcaaaaaagc
attgttgtggaggaagaacggatctattctatccggcagtatgaagaagaaacacagacc
gcttccatgatagccagacggcttttggagaagccggttttgctgtccattgaaccggag
ctggaaaaggcacagaagacactggggatcacgctgtcagaaacacagaaacaggcagtg
cggatggtgtttgcacatcccatcagtattattaccggaggtcccggaaccggaaagaca
acggttctcaaggtgattctctatatccatcaggcgttatgcaggtcagaggtacagctt
atggctccgaccggacgtgcggcaagacgtatggtggagagtaccggctgtgaaaatgca
tccacgatgcatctggccctggggcttttgggagatgatacggattttgaaccggatttt
gagtacctgtctgccggatttctaaatgtagatgaggtgtccatggtggacatgcatctt
gcctatgaatttttccggcgggttagcagacatgccagagtccttttagtcggggataag
aaccagcttccatccgtaggagccggggatgtgttccggcaactgattgcctgcgggctg
attccggtcacggtactggatctggtttaccggcagggcgctttgagcagcataccttat
aatgcaaaactgatgcaggagaataagactaatctgagctttggggaggattttcagttc
attgcctgtaaaggagcagatgaagcggcagagattgtccggaggatttatctggacgag
attgcaaaaaacggcatggatcaggtacagatcctgactccgtatcggaaacgcagtgct
gccggagtggatgaattgaacaaatctctggaggattttgtaaatccgccaatcgcaggg
aagaaggaactgcatatcggcagtcaggtgttccgggttggcgataagattttacagaat
aaaaataccgagatggcgagtaacggcgatctgggcaggatactggactgtatcacggat
gaggatggaaatgccagggcagtgatcggattcccggatgggcggcaggtgcaatatgaa
gctgaccagatggaaatgatcgaacatgctaacgcaacaaccatccataaggcacagggt
tccgaatgtccggttgtcatcatcccttgggtaaaagccttttatatgatgctgaagcgc
aatattctctataccggagtgaccagagcgaaaagcaaggtttatctggtaggggaatgg
gctgcagtctgtcaggcaatccatacggatgacagcgggacaaggaacaccattctgagt
gagcggatcgtacagtattacgatcagtatcagagtgaacagaaaccggaaatggagcag
ttaaaacttgttgtttaa
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