Coprococcus comes: I6K69_11860
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Entry
I6K69_11860 CDS
T07118
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
ccom
Coprococcus comes
Brite
KEGG Orthology (KO) [BR:
ccom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccom03032
]
I6K69_11860
03036 Chromosome and associated proteins [BR:
ccom03036
]
I6K69_11860
03400 DNA repair and recombination proteins [BR:
ccom03400
]
I6K69_11860
DNA replication proteins [BR:
ccom03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
I6K69_11860
Chromosome and associated proteins [BR:
ccom03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
I6K69_11860
DNA repair and recombination proteins [BR:
ccom03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
I6K69_11860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
DUF2267
HU-CCDC81_euk_2
HU-DNA_bdg
Transposase_mut
UBA_HYPK
A_thal_3526
DUF7342
Motif
Other DBs
NCBI-ProteinID:
QRT48954
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All DBs
Position
2424586..2424861
Genome browser
AA seq
91 aa
AA seq
DB search
MNKTELVAAVAEQADISKKDAEKVLKAFVDVVTEEMKKGEKVQLVGFGTFEVSERAAREG
RNPQTGKTMKIEACKAPKFKAGKALKDAVNA
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaataagacagaattagtagctgcagttgcagaacaggcagatatttcaaagaaagat
gcagaaaaagtattaaaagcatttgttgatgttgttacagaagaaatgaaaaaaggtgaa
aaagttcagttagtaggattcggaactttcgaagtaagcgaaagagctgcaagagaagga
agaaatccacagactggaaaaactatgaagatcgaagcttgcaaggctccgaaattcaaa
gcaggaaaagctttaaaagatgctgttaatgcataa
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