Coprococcus comes: I6K69_12340
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Entry
I6K69_12340 CDS
T07118
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ccom
Coprococcus comes
Pathway
ccom03420
Nucleotide excision repair
ccom03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
I6K69_12340
03430 Mismatch repair
I6K69_12340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccom03400
]
I6K69_12340
Enzymes [BR:
ccom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I6K69_12340
DNA repair and recombination proteins [BR:
ccom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I6K69_12340
MMR (mismatch excision repair)
Other MMR factors
I6K69_12340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_11
AAA_30
Microtub_bd
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
QRT49037
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All DBs
Position
2511872..2513467
Genome browser
AA seq
531 aa
AA seq
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MINEPTNEQKAILNYNGNTVVTANPGSGKTYTVVEKIGKVLHDLPSYKGIIAISFTNKAS
DELKKRCKRKGINAKSSFFGTIDKFYISEIIIPFASHLTHVMPEYQVVESTETEKHYSEL
GMITENVTKEQGALLKEALCKGKIFLNISGEMAWYIMCNVPGVRKYMQSRYSHVFIDEYQ
DCGKIQHDIFLALCEMGIIGVAVGDVNQAIYGFTNRFPRYLLELIGKDDFEHFELSKNHR
CHPSISEYSLCLYGISKEIIEDKRIFRVSVDGNEVNIAKKIDLAIPKIKRKYNVANNNQI
AILCRNNGTIKILDQAIETPHKVFAETPLDRDNSEWGRLFRSLLVAKFDQEIFPVDYAEQ
LFSEEYDPEKYREVLKACDIIFNSSTEELADVIIEFEKVAELVYPGKKNKKAKELLDAII
ADDILLENYIPPQDNEITIMTLHKSKGLEFNVVFHMDMYKYIISDELGDAEEKKQSLNLH
YVGITRAIDVCYIMNGTRRYRAKYGDFYDAKPSSFLFMPGLSERRNDVRWD
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgattaatgaaccaacaaatgaacaaaaagcaattctaaattataacggaaatactgta
gttacggcaaatcctggctccggtaaaacttacacagtggtagaaaaaataggaaaagta
ctgcatgatcttccgagttataaaggaattattgcaatttcctttacaaataaagctagc
gatgaattaaagaaaagatgtaaaagaaaggggataaatgcaaaatcatctttctttgga
acaatcgataagttttacatttcggaaattattattccatttgcgagtcatttgacacat
gtaatgcctgagtatcaggtggtagaatccacagagacagaaaaacattattcggaatta
ggaatgattaccgaaaatgttacaaaagaacagggggcattgctaaaagaagcattatgt
aaagggaaaatctttttaaatatatctggtgaaatggcatggtatataatgtgtaatgta
ccaggtgtaaggaaatatatgcagtcacgatattcccatgtgttcattgatgagtatcaa
gactgtggtaagatacagcacgatatttttcttgcattatgtgagatgggaattataggg
gttgctgttggagatgtaaatcaagcaatttatgggttcacgaatagatttccacgatat
ttactcgaattaataggaaaagatgattttgaacattttgaattaagcaaaaaccataga
tgtcatccaagcatatcagaatattccttatgtctgtatggtatttcaaaagaaattatt
gaggataagagaatttttagagtgtctgtggatggaaatgaagtaaatatagcaaaaaag
atagatttggcaattcctaagataaaacgaaaatataatgttgctaataataatcaaata
gcgatattgtgtcgaaacaatggtacgataaaaatattagaccaagcaatagagacacct
cataaagtctttgctgaaacaccgttagatagagataattcagagtggggaaggttattc
cgaagtttacttgtggctaaatttgatcaagaaatctttcctgtggattatgcagaacaa
ttgttttcagaggaatatgatccggaaaaatatagagaagtacttaaggcctgtgatatt
attttcaatagttcgacagaagaattagcggatgtaattattgagtttgaaaaagttgct
gagttagtgtatccaggtaagaaaaataaaaaagcaaaggaactattggatgcaattatt
gcagatgatatattgcttgagaattatataccgccacaagataatgagattactattatg
acattacataaatcaaaaggacttgaattcaatgtggtttttcatatggatatgtataaa
tatattatttctgatgaactaggagatgcagaagaaaagaaacaatcgcttaatttgcat
tatgtaggtataactcgtgctatagatgtatgctatattatgaatggaacaagaagatat
agagcgaaatacggtgatttttatgatgcaaagccatcttcatttttgtttatgcccggt
ttatctgaacgaagaaatgatgttagatgggattag
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