KEGG   Coprococcus comes: I6K69_15685
Entry
I6K69_15685       CDS       T07118                                 
Name
(GenBank) PolC-type DNA polymerase III
  KO
K03763  DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
Organism
ccom  Coprococcus comes
Pathway
ccom03030  DNA replication
ccom03430  Mismatch repair
ccom03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ccom00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    I6K69_15685
   03430 Mismatch repair
    I6K69_15685
   03440 Homologous recombination
    I6K69_15685
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ccom03032]
    I6K69_15685
   03400 DNA repair and recombination proteins [BR:ccom03400]
    I6K69_15685
Enzymes [BR:ccom01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     I6K69_15685
DNA replication proteins [BR:ccom03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     I6K69_15685
DNA repair and recombination proteins [BR:ccom03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     I6K69_15685
SSDB
Motif
Pfam: DNA_pol3_alpha RNase_T PHP DNA_pol3_finger DNA_pol3_a_NI DNA_pol3_a_NII HHH_6 Rv2179c-like RNase_H_2 DEDDh_C tRNA_anti-codon DNA_ligase_ZBD
Other DBs
NCBI-ProteinID: QRT49629
LinkDB
Position
3233871..3238478
AA seq 1535 aa
MTKLFFDVFPTLNIDNDSHMLFEKVEVTKITSTSARNHIKVYIYSTHLIPKKTVCYVENQ
IEEQLFSQGNIPVTIIEEYRLSEQYTPENLMHAYKESILFELEQKSVLEKNMFQKAKCRF
EGERTMCLTMADTIVAEGKTSEITSYLKDVFENRFHVPVDVEIDYEEVGESKYKKFNEMQ
LQQEVDAIRERNQKLQAQHATEEAVKAKETEGVSKKKAEKAEDAAKEADASSTQNKQEQK
KPETPKKQEFAGKSSGFKSGKGSFVRRDYPLKRSDDPNVIYGRDFDDMPIELKTVTGEMG
EITFRGQVISFDTREIRNEKTIVMFAVTDFTDTIMVKMFTRNDQLPDLLAEIKKGVFLKI
KGVTTIDKFDGELTIGSVTGIRKTSDFRVTRKDKYPEKRVELHCHTKMSDMDGVSEAKDL
VKRAHDWGHPAIAITDHGVVQGFTDANHVIEDLDKDDPFKVIYGVEGYLVDDLTKIAENE
KGQDLEGTYVVFDIETTGFSAVTDRIIEIGAVKVEDGKITDKFSTFVNPKRPIPFRITEL
TSITDEMVIDSPDIETILPQFIEFIGDAVLVAHNASFDVGFIEQNCKRQKIEADFTYVDT
VALARVLLPALNRFKLDTVAKALNISLENHHRAVDDAGCTAEIFVKFVQMLKERELTTLA
KVNEFGDLNPDSIKKLPTYHVIILARNDIGRVNLYQLVSASHLVYYNRRPRIPKSVLNEH
REGLIVGSACEAGELYRALLDGKPDETIAKIVDFYDYLEIQPLGNNAFMVESDKVTSVNS
MEDIMDLNQKIVHLGEQFHKPVVGTCDVHFMDPEDEVYRRIIMAGKGFGDADKQAPLYLR
TTEEMLDEFAYLGSEKAYEVVIRNTNLIADMIEKISPVRPDKCPPVIENSDQMLRDICYN
KAHSMYGDPLPEIVHERLERELNSIISNGFAVMYIIAQKLVWKSNEDGYLVGSRGSVGSS
FVATMAGITEVNPLVPHYYCSNCHYSDFDSEEVKKYVGGCGHDMPDKNCPVCGQKLVKDG
FDIPFETFLGFKGNKEPDIDLNFSGDYQSKAHKYTEVIFGKGQTFRAGTIAALAEKTAYG
YVKNYYEERGDRKRNCEIDRIVAGCTGIRRSTGQHPGGIVVLPHGEDINSFTPIQHPAND
MTTDIITTHFDYHSIDHNLLKLDILGHDDPTMIKTLEELINSDAMDNKYDGVNNVFKATD
IPLDDPGVMGLFAGTEVLGITPEDIDGCPLGCLGVPEFGTDFVIQMVIDTKPKTLSDLIR
ISGLSHGTDVWLNNAQTLIEEGKATISTAICTRDDIMTYLINKGVESEESFTIMERVRKG
TVAKGKCKEWSQFKKDMLEHDVPEWYIWSCERIKYMFPKAHAAAYVMMAYRIAYCKINYP
LAYYAAYFGIRASAFSYELMGQGKEKLLYHMKEYKRRAELNQLSKKDQDTLKDMKNVLEM
YARGFDFLPIDIYKSKASKFQIVGDKLLPPFNTIDGMGDKAAEAMEIAAKDGPYLSKDDF
RQRTKVSKTLVDLMADMGLLGDLPETNQLSLFDFA
NT seq 4608 nt   +upstreamnt  +downstreamnt
atgacaaagctattttttgatgtgtttccaacattgaatattgataacgacagccatatg
ttgtttgaaaaggtggaggtgacgaaaatcacctccacttcagccagaaatcatatcaag
gtttatatttacagtacccatctgatcccgaagaagacggtatgttatgtggagaaccag
attgaggaacagctgttttcgcagggaaatattccggtgacgatcatcgaggaataccgg
ctttccgagcagtatacgccggagaacctgatgcatgcctacaaggagagtattcttttt
gagctggagcagaaaagtgtgctggagaaaaatatgttccagaaggcaaagtgccgcttc
gaaggggagcgtactatgtgtctgactatggcggacacgattgttgcagagggaaagacc
agcgagatcaccagctatctgaaggatgtctttgagaaccgtttccacgtgccggtggat
gtagaaattgattatgaagaagtaggagagagcaaatacaagaaattcaatgaaatgcag
cttcagcaggaagtagatgcgatcagggaaaggaatcagaagctgcaggcacagcatgcc
acggaagaggcggtaaaagcaaaagaaacggaaggcgtatcaaagaagaaagcggaaaaa
gcagaagatgccgctaaagaagcagatgcatcaagtacgcagaataaacaggaacagaag
aaaccggagactccgaaaaagcaggaatttgcaggaaagtccagtgggttcaaaagtggc
aagggaagctttgtgcgtcgggattatccgctcaagcgctccgatgacccgaacgtaatt
tatggacgggactttgacgatatgccgatcgagctgaagacagttaccggagagatgggt
gagattactttccggggacaggtgatcagctttgatacccgtgagatccggaacgaaaag
acaatcgtcatgtttgccgtgaccgactttaccgacacgatcatggtcaagatgtttaca
cgcaatgaccagctcccggatctgcttgcggagattaaaaaaggtgtatttctgaaaatc
aaaggagttacgacgattgataaatttgatggagagctgaccattggttctgtaaccgga
atccgcaaaacttcggatttccgtgtaacaagaaaagacaagtatccggaaaaacgcgtg
gagcttcactgccataccaagatgagcgatatggatggtgtttccgaggcaaaagatctg
gtaaagcgagcacatgactgggggcacccggcgattgcaatcaccgatcatggtgtggtg
caggggtttaccgatgccaatcatgtgatcgaggatctggataaggatgatccatttaaa
gttatttatggagtggaaggatatctggtagatgatctgactaagatcgcagagaacgaa
aaaggacaggacctggaaggcacttacgtggtattcgatatcgagacaaccggtttttcc
gctgtgactgaccggatcatcgagattggcgcggtaaaagtggaagacggtaagattaca
gataagttcagtacctttgtcaatccgaaacgtccgatcccgttccgtatcacggaactt
accagcatcaccgatgagatggtcatcgattcgccggatattgagacgatcttgccgcag
tttatagaatttattggcgatgcggttctggtggcgcataatgcttcttttgatgtggga
tttatcgagcagaactgcaaaaggcagaagattgaggctgattttacttatgtagatacc
gttgcacttgcccgtgtccttcttccggcactgaaccgtttcaagctggataccgttgca
aaagctttaaatatttccctggagaatcatcaccgcgcagttgatgatgcaggctgcacg
gcagaaatctttgtgaaatttgtgcagatgcttaaagaacgggaactgacaacgcttgca
aaagttaatgaatttggggatctgaacccggattctattaaaaagcttccgacttatcat
gtcattattcttgcaagaaatgacattggtcgtgtgaatttgtatcagcttgtttctgca
tcccatctggtttactataatcgcagaccccgtatcccgaaaagtgtgctaaatgagcac
cgggaaggtctgatcgtgggaagtgcctgcgaagccggagagctttaccgtgcacttctg
gatggaaagccggatgagacgatcgcgaagatcgtggatttttatgactatctggaaatc
cagccgcttggaaacaatgcatttatggtagagagtgacaaagtaacttcggtcaattct
atggaagatatcatggatctgaaccagaagatcgtgcatcttggggagcagttccacaaa
ccggtcgtgggaacctgtgacgtacatttcatggatccggaagatgaggtataccgccgg
atcatcatggcaggaaaaggatttggagatgccgataagcaggcaccactataccttcgt
acaacggaggaaatgctggatgaatttgcctaccttggttcggaaaaagcgtatgaagtt
gtgatcaggaacaccaatctgatcgcggatatgatcgagaagatttctccggtccgcccg
gataagtgtcctccggttattgagaattccgaccagatgctgcgagatatctgttataat
aaagcccattctatgtacggggatccccttccggagatcgtacatgaacgactggaaaga
gaactgaattccatcatttccaatggatttgcggttatgtatatcattgcgcagaagctg
gtatggaaatccaacgaggatggttacctggtaggatcccgtggttcggtaggatcttca
ttcgttgcaactatggcaggaatcacggaggtcaatcctctggttccacattactattgc
agcaattgccactatagtgattttgattcggaagaagtgaaaaaatatgtgggtggctgt
ggacacgatatgccggataagaactgtccggtctgtggacagaagctggtcaaagacgga
tttgatattccatttgagactttccttggattcaagggaaacaaagagccggatatcgac
ctgaacttctccggagattaccagagtaaagcgcataagtatacggaggttattttcgga
aaaggtcagaccttccgtgccggaaccattgccgcacttgcagaaaagacggcttatgga
tatgtgaagaattattatgaggagcgtggtgaccgtaagcgaaattgcgagatcgatcgt
atcgtagctggctgtaccggaatccgccgaagtaccggacagcatccggggggaattgtg
gttcttccgcatggagaggacattaactctttcactccaatccagcatccggcaaatgat
atgacgaccgatattatcaccactcattttgattatcattccatcgaccacaaccttttg
aaattggatattctcggacacgatgatccgaccatgatcaaaacgctggaagagctgatc
aattccgatgcgatggacaataaatacgatggagtgaataatgtatttaaagcgactgat
attccattggatgatccaggtgtaatgggactttttgcaggaacagaggtgctcggtatc
acaccggaggacattgacggatgtccgcttggttgtctgggagtcccggagtttggtaca
gattttgttatccagatggtaattgataccaagccaaagacactttcggacctgatccgt
atttcaggtctgtctcatggaacagatgtgtggctgaacaatgcacagactctgattgaa
gaaggaaaggcaaccatttccacggcaatctgtacccgtgatgatatcatgacttatctg
atcaacaaaggtgttgaaagtgaagaatccttcacaatcatggaacgtgtgcgtaaagga
accgtcgcaaaaggaaaatgtaaagagtggtcacagtttaaaaaagatatgctggagcat
gacgtgccggaatggtatatctggtcctgtgagcggatcaaatacatgttcccgaaagcc
catgctgcagcttatgtcatgatggcataccggattgcctactgcaagatcaattatccg
cttgcctattatgcggcatacttcggaatccgtgcatctgcattttcttacgaactgatg
ggacagggaaaagaaaaacttctctaccatatgaaagaatataaaagaagagcagaactc
aatcagctcagtaaaaaagatcaggataccttaaaagatatgaaaaatgtactggaaatg
tatgccagaggatttgattttttaccgatcgatatctacaaatccaaagcatccaagttc
cagatcgtcggcgataagctccttccaccgttcaacaccattgacggcatgggcgataaa
gccgccgaggctatggaaattgccgctaaagacggaccatacctctctaaagacgatttc
cgtcagagaacaaaagtcagcaagacattggttgacttgatggcagatatgggtttgctg
ggcgacctcccggagaccaatcagttatccctgtttgattttgcctaa

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