Coprococcus comes: I6K69_15685
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Entry
I6K69_15685 CDS
T07118
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
ccom
Coprococcus comes
Pathway
ccom03030
DNA replication
ccom03430
Mismatch repair
ccom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I6K69_15685
03430 Mismatch repair
I6K69_15685
03440 Homologous recombination
I6K69_15685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccom03032
]
I6K69_15685
03400 DNA repair and recombination proteins [BR:
ccom03400
]
I6K69_15685
Enzymes [BR:
ccom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I6K69_15685
DNA replication proteins [BR:
ccom03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I6K69_15685
DNA repair and recombination proteins [BR:
ccom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I6K69_15685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NI
DNA_pol3_a_NII
HHH_6
Rv2179c-like
RNase_H_2
DEDDh_C
tRNA_anti-codon
DNA_ligase_ZBD
Motif
Other DBs
NCBI-ProteinID:
QRT49629
LinkDB
All DBs
Position
3233871..3238478
Genome browser
AA seq
1535 aa
AA seq
DB search
MTKLFFDVFPTLNIDNDSHMLFEKVEVTKITSTSARNHIKVYIYSTHLIPKKTVCYVENQ
IEEQLFSQGNIPVTIIEEYRLSEQYTPENLMHAYKESILFELEQKSVLEKNMFQKAKCRF
EGERTMCLTMADTIVAEGKTSEITSYLKDVFENRFHVPVDVEIDYEEVGESKYKKFNEMQ
LQQEVDAIRERNQKLQAQHATEEAVKAKETEGVSKKKAEKAEDAAKEADASSTQNKQEQK
KPETPKKQEFAGKSSGFKSGKGSFVRRDYPLKRSDDPNVIYGRDFDDMPIELKTVTGEMG
EITFRGQVISFDTREIRNEKTIVMFAVTDFTDTIMVKMFTRNDQLPDLLAEIKKGVFLKI
KGVTTIDKFDGELTIGSVTGIRKTSDFRVTRKDKYPEKRVELHCHTKMSDMDGVSEAKDL
VKRAHDWGHPAIAITDHGVVQGFTDANHVIEDLDKDDPFKVIYGVEGYLVDDLTKIAENE
KGQDLEGTYVVFDIETTGFSAVTDRIIEIGAVKVEDGKITDKFSTFVNPKRPIPFRITEL
TSITDEMVIDSPDIETILPQFIEFIGDAVLVAHNASFDVGFIEQNCKRQKIEADFTYVDT
VALARVLLPALNRFKLDTVAKALNISLENHHRAVDDAGCTAEIFVKFVQMLKERELTTLA
KVNEFGDLNPDSIKKLPTYHVIILARNDIGRVNLYQLVSASHLVYYNRRPRIPKSVLNEH
REGLIVGSACEAGELYRALLDGKPDETIAKIVDFYDYLEIQPLGNNAFMVESDKVTSVNS
MEDIMDLNQKIVHLGEQFHKPVVGTCDVHFMDPEDEVYRRIIMAGKGFGDADKQAPLYLR
TTEEMLDEFAYLGSEKAYEVVIRNTNLIADMIEKISPVRPDKCPPVIENSDQMLRDICYN
KAHSMYGDPLPEIVHERLERELNSIISNGFAVMYIIAQKLVWKSNEDGYLVGSRGSVGSS
FVATMAGITEVNPLVPHYYCSNCHYSDFDSEEVKKYVGGCGHDMPDKNCPVCGQKLVKDG
FDIPFETFLGFKGNKEPDIDLNFSGDYQSKAHKYTEVIFGKGQTFRAGTIAALAEKTAYG
YVKNYYEERGDRKRNCEIDRIVAGCTGIRRSTGQHPGGIVVLPHGEDINSFTPIQHPAND
MTTDIITTHFDYHSIDHNLLKLDILGHDDPTMIKTLEELINSDAMDNKYDGVNNVFKATD
IPLDDPGVMGLFAGTEVLGITPEDIDGCPLGCLGVPEFGTDFVIQMVIDTKPKTLSDLIR
ISGLSHGTDVWLNNAQTLIEEGKATISTAICTRDDIMTYLINKGVESEESFTIMERVRKG
TVAKGKCKEWSQFKKDMLEHDVPEWYIWSCERIKYMFPKAHAAAYVMMAYRIAYCKINYP
LAYYAAYFGIRASAFSYELMGQGKEKLLYHMKEYKRRAELNQLSKKDQDTLKDMKNVLEM
YARGFDFLPIDIYKSKASKFQIVGDKLLPPFNTIDGMGDKAAEAMEIAAKDGPYLSKDDF
RQRTKVSKTLVDLMADMGLLGDLPETNQLSLFDFA
NT seq
4608 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagctattttttgatgtgtttccaacattgaatattgataacgacagccatatg
ttgtttgaaaaggtggaggtgacgaaaatcacctccacttcagccagaaatcatatcaag
gtttatatttacagtacccatctgatcccgaagaagacggtatgttatgtggagaaccag
attgaggaacagctgttttcgcagggaaatattccggtgacgatcatcgaggaataccgg
ctttccgagcagtatacgccggagaacctgatgcatgcctacaaggagagtattcttttt
gagctggagcagaaaagtgtgctggagaaaaatatgttccagaaggcaaagtgccgcttc
gaaggggagcgtactatgtgtctgactatggcggacacgattgttgcagagggaaagacc
agcgagatcaccagctatctgaaggatgtctttgagaaccgtttccacgtgccggtggat
gtagaaattgattatgaagaagtaggagagagcaaatacaagaaattcaatgaaatgcag
cttcagcaggaagtagatgcgatcagggaaaggaatcagaagctgcaggcacagcatgcc
acggaagaggcggtaaaagcaaaagaaacggaaggcgtatcaaagaagaaagcggaaaaa
gcagaagatgccgctaaagaagcagatgcatcaagtacgcagaataaacaggaacagaag
aaaccggagactccgaaaaagcaggaatttgcaggaaagtccagtgggttcaaaagtggc
aagggaagctttgtgcgtcgggattatccgctcaagcgctccgatgacccgaacgtaatt
tatggacgggactttgacgatatgccgatcgagctgaagacagttaccggagagatgggt
gagattactttccggggacaggtgatcagctttgatacccgtgagatccggaacgaaaag
acaatcgtcatgtttgccgtgaccgactttaccgacacgatcatggtcaagatgtttaca
cgcaatgaccagctcccggatctgcttgcggagattaaaaaaggtgtatttctgaaaatc
aaaggagttacgacgattgataaatttgatggagagctgaccattggttctgtaaccgga
atccgcaaaacttcggatttccgtgtaacaagaaaagacaagtatccggaaaaacgcgtg
gagcttcactgccataccaagatgagcgatatggatggtgtttccgaggcaaaagatctg
gtaaagcgagcacatgactgggggcacccggcgattgcaatcaccgatcatggtgtggtg
caggggtttaccgatgccaatcatgtgatcgaggatctggataaggatgatccatttaaa
gttatttatggagtggaaggatatctggtagatgatctgactaagatcgcagagaacgaa
aaaggacaggacctggaaggcacttacgtggtattcgatatcgagacaaccggtttttcc
gctgtgactgaccggatcatcgagattggcgcggtaaaagtggaagacggtaagattaca
gataagttcagtacctttgtcaatccgaaacgtccgatcccgttccgtatcacggaactt
accagcatcaccgatgagatggtcatcgattcgccggatattgagacgatcttgccgcag
tttatagaatttattggcgatgcggttctggtggcgcataatgcttcttttgatgtggga
tttatcgagcagaactgcaaaaggcagaagattgaggctgattttacttatgtagatacc
gttgcacttgcccgtgtccttcttccggcactgaaccgtttcaagctggataccgttgca
aaagctttaaatatttccctggagaatcatcaccgcgcagttgatgatgcaggctgcacg
gcagaaatctttgtgaaatttgtgcagatgcttaaagaacgggaactgacaacgcttgca
aaagttaatgaatttggggatctgaacccggattctattaaaaagcttccgacttatcat
gtcattattcttgcaagaaatgacattggtcgtgtgaatttgtatcagcttgtttctgca
tcccatctggtttactataatcgcagaccccgtatcccgaaaagtgtgctaaatgagcac
cgggaaggtctgatcgtgggaagtgcctgcgaagccggagagctttaccgtgcacttctg
gatggaaagccggatgagacgatcgcgaagatcgtggatttttatgactatctggaaatc
cagccgcttggaaacaatgcatttatggtagagagtgacaaagtaacttcggtcaattct
atggaagatatcatggatctgaaccagaagatcgtgcatcttggggagcagttccacaaa
ccggtcgtgggaacctgtgacgtacatttcatggatccggaagatgaggtataccgccgg
atcatcatggcaggaaaaggatttggagatgccgataagcaggcaccactataccttcgt
acaacggaggaaatgctggatgaatttgcctaccttggttcggaaaaagcgtatgaagtt
gtgatcaggaacaccaatctgatcgcggatatgatcgagaagatttctccggtccgcccg
gataagtgtcctccggttattgagaattccgaccagatgctgcgagatatctgttataat
aaagcccattctatgtacggggatccccttccggagatcgtacatgaacgactggaaaga
gaactgaattccatcatttccaatggatttgcggttatgtatatcattgcgcagaagctg
gtatggaaatccaacgaggatggttacctggtaggatcccgtggttcggtaggatcttca
ttcgttgcaactatggcaggaatcacggaggtcaatcctctggttccacattactattgc
agcaattgccactatagtgattttgattcggaagaagtgaaaaaatatgtgggtggctgt
ggacacgatatgccggataagaactgtccggtctgtggacagaagctggtcaaagacgga
tttgatattccatttgagactttccttggattcaagggaaacaaagagccggatatcgac
ctgaacttctccggagattaccagagtaaagcgcataagtatacggaggttattttcgga
aaaggtcagaccttccgtgccggaaccattgccgcacttgcagaaaagacggcttatgga
tatgtgaagaattattatgaggagcgtggtgaccgtaagcgaaattgcgagatcgatcgt
atcgtagctggctgtaccggaatccgccgaagtaccggacagcatccggggggaattgtg
gttcttccgcatggagaggacattaactctttcactccaatccagcatccggcaaatgat
atgacgaccgatattatcaccactcattttgattatcattccatcgaccacaaccttttg
aaattggatattctcggacacgatgatccgaccatgatcaaaacgctggaagagctgatc
aattccgatgcgatggacaataaatacgatggagtgaataatgtatttaaagcgactgat
attccattggatgatccaggtgtaatgggactttttgcaggaacagaggtgctcggtatc
acaccggaggacattgacggatgtccgcttggttgtctgggagtcccggagtttggtaca
gattttgttatccagatggtaattgataccaagccaaagacactttcggacctgatccgt
atttcaggtctgtctcatggaacagatgtgtggctgaacaatgcacagactctgattgaa
gaaggaaaggcaaccatttccacggcaatctgtacccgtgatgatatcatgacttatctg
atcaacaaaggtgttgaaagtgaagaatccttcacaatcatggaacgtgtgcgtaaagga
accgtcgcaaaaggaaaatgtaaagagtggtcacagtttaaaaaagatatgctggagcat
gacgtgccggaatggtatatctggtcctgtgagcggatcaaatacatgttcccgaaagcc
catgctgcagcttatgtcatgatggcataccggattgcctactgcaagatcaattatccg
cttgcctattatgcggcatacttcggaatccgtgcatctgcattttcttacgaactgatg
ggacagggaaaagaaaaacttctctaccatatgaaagaatataaaagaagagcagaactc
aatcagctcagtaaaaaagatcaggataccttaaaagatatgaaaaatgtactggaaatg
tatgccagaggatttgattttttaccgatcgatatctacaaatccaaagcatccaagttc
cagatcgtcggcgataagctccttccaccgttcaacaccattgacggcatgggcgataaa
gccgccgaggctatggaaattgccgctaaagacggaccatacctctctaaagacgatttc
cgtcagagaacaaaagtcagcaagacattggttgacttgatggcagatatgggtttgctg
ggcgacctcccggagaccaatcagttatccctgtttgattttgcctaa
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integrated database retrieval system