Coprococcus comes: I6K69_15960
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Entry
I6K69_15960 CDS
T07118
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
ccom
Coprococcus comes
Brite
KEGG Orthology (KO) [BR:
ccom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccom03009
]
I6K69_15960 (rlmD)
Enzymes [BR:
ccom01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
I6K69_15960 (rlmD)
Ribosome biogenesis [BR:
ccom03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
I6K69_15960 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Cons_hypoth95
MTS
Methyltransf_25
TRM5-TYW2_MTfase
Methyltransf_15
Methyltransf_4
PrmA
N6_N4_Mtase
Methyltransf_11
HSD_C
PCMT
Ubie_methyltran
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
QRT49676
LinkDB
All DBs
Position
3291666..3292841
Genome browser
AA seq
391 aa
AA seq
DB search
MEEKKKQTEPEACKVAKKCGGCQYQGVPYKEQLKKKQKMVNALLSKYGKVEPIIGMENPY
YYRNKVHAVFDRDRKGNIVSGTYEAKTHRVVPVENCLIEDKKSQEIIRTIRGLLKSFKIK
TYDEDTGYGLFRHVLIRRGFKSGEIMVVLVLGSPILPSSNNFVKALRKEHPEITTVVLNI
NDRKTSMILGEREKVLYGKGFIRDELCGCTFRISPKSFYQVNPVQTEILYQKAIEFAHLT
GKESVIDAYCGIGTIGLIASGHAKEVVGVELNKDAVKDAILNAKENQIRNVRFFQGDAGE
FMEAMAAEGNSMDVLFMDPPRAGSDEKFMASAVKMGPEKIVYISCNPETLARDLKYLTKK
GYQVKKIQPVEMFAFTEHVETVCLLSKKCPV
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagaaaaaacagacagaaccggaagcctgtaaagtggcaaaaaaatgcgga
ggatgccagtatcagggagtgccatataaggagcagctgaaaaagaagcagaaaatggtg
aacgctctgttgtcaaaatacggaaaagtagaaccgatcatcggaatggagaatccgtat
tattacagaaataaagtacacgccgtattcgacagggaccgaaagggaaatatcgtatcc
ggaacctatgaagcgaagacacaccgggtcgttcctgttgaaaactgtctgatcgaagac
aaaaagagtcaggagatcatccggacgatccggggacttttgaaatcttttaagatcaaa
acctatgatgaagatacaggatatggcctgttccgtcatgtgctgatcagaagagggttt
aaaagcggagagattatggtggttctggtgcttggatcaccaatccttccatcgtctaat
aatttcgtaaaagcactcagaaaagagcatccggagattacaacggttgtccttaatatc
aacgacagaaagaccagtatgatccttggggagagagaaaaagtgttatatgggaaagga
tttatccgggatgaactctgcgggtgtactttccggatttcaccaaagtccttctatcag
gtaaatccggtgcagacggagatcctttatcagaaagcgattgaatttgcacatctgaca
gggaaagaaagcgtgatcgatgcctattgcggaatcggaacgatcggtctgatcgcatcg
ggacatgcaaaagaagtagtcggtgtagaacttaataaggatgccgtgaaggatgcaata
ttaaatgcaaaagagaatcagatccggaatgtgagatttttccagggagatgccggggag
tttatggaggcgatggcggcagagggaaatagtatggatgtgctgtttatggatccgccg
agagccggaagtgatgaaaaatttatggcatctgcagtgaagatgggaccggagaagatc
gtgtacatttcctgcaatccggagacactggcaagagatctgaagtatctgacaaaaaaa
ggatatcaggtaaaaaagatacagccggtggaaatgtttgcgtttacggaacacgttgaa
acagtttgtctcctttcaaagaaatgcccagtttaa
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integrated database retrieval system
