Cronobacter condimenti: AFK62_01410
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Entry
AFK62_01410 CDS
T04060
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ccon
Cronobacter condimenti
Pathway
ccon03420
Nucleotide excision repair
ccon03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AFK62_01410 (uvrD)
03430 Mismatch repair
AFK62_01410 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccon03400
]
AFK62_01410 (uvrD)
Enzymes [BR:
ccon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AFK62_01410 (uvrD)
DNA repair and recombination proteins [BR:
ccon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AFK62_01410 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
AFK62_01410 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ALB61252
LinkDB
All DBs
Position
302376..304538
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AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQREAVAAPRSNMLVLAGAGSGKTRVLVHRIAWLLMVENCSPYSIMAV
TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDASLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPPRQAMWYINGKKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILNHYRERFTNILVDEFQDTNGIQYAWIRMLAGET
GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFQGAQTIRLEQNYRSTNNILNAANALIANN
AGRLGKELWTDGSDGDPISLYCAFNELDEARFVVNRIKVWQENGGALQDCAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRHTSRDRQMTLWQASRHLLQEKALAGRAASALQRFLELIEALAHETIDMPLHVQ
TDRVIKDSGLWLMYEQEKGEKGQARIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL
EAGEGQADAWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMALDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEAYHRPSRFIAELPEGCVEEVRLRASISRPVSHKQLG
APVTQNDSGYKLGQRVRHPKFGEGTIVNLEGSGEHSRLQVAFNGQGIKWLVAAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttacctgctcgacagccttaacgataaacagcgcgaagccgtagccgcg
ccgcgcagcaatatgctggtgctggcaggcgcgggcagcggaaagacgcgcgtgctggtg
catcgtatcgcctggctgctcatggtagaaaactgttcgccgtattccattatggcggtg
accttcaccaacaaagcggcggcggaaatgcgccaccgtatcggtcaactcatgggcacc
agccagggcggcatgtgggtcggaacgtttcacgggctcgcccaccgtctgctgcgcgca
caccatatggacgccagtctgccgcaggatttccagatcctcgacagcgaagatcaactg
cgtctgctcaaacgtctcatcaaggcgatgaaccttgatgagaaacagtggccgccgcgc
caggcgatgtggtacatcaacggcaaaaaagacgagggcctgcgcccgcaccatattcag
agctacggtaacccggttgagcagacctggcagaaagtctatcaggcgtatcaggaggcg
tgtgaccgcgcgggcctggtggatttcgccgagctgctgctgcgcgctcatgagttatgg
cttaataaaccgcacattctgaatcactaccgcgagcgcttcaccaacattctggtggac
gagttccaggacaccaacggcattcagtatgcctggatccgtatgctggcgggcgagacg
ggcaaagtgatgatcgtgggcgacgatgaccagtcgatttacggctggcgcggcgcgcag
gtagaaaacatccagcgcttcctgaacgatttccagggggcgcagaccatccgtcttgag
caaaactaccgctcgaccaacaatatcctgaacgccgccaacgcccttatcgccaataac
gccgggcgtcttggtaaagagctgtggaccgacggcagcgacggggacccgatctccttg
tactgtgcgtttaatgaactggacgaagcgcgctttgtcgtgaaccgcatcaaggtgtgg
caggagaacggcggcgcgctacaggattgcgcgatcctctatcgcagcaacgcccagtcg
cgcgtgctggaagaggcgctgttacaggcgagcatgccgtatcgtatttacggcggtatg
cgattcttcgaacgccaggaaatcaaagacgcgctctcatatctgcgtcttatcgctaat
cgcaacgacgatgcggcctttgagcgcgtggtgaatacgccaacacgcggcattggcgat
cgcacgctggatgtcgtgcgccatacctcgcgtgaccgtcagatgacgctctggcaggcg
agccgccacctgttgcaggagaaagcgctggccggacgcgccgcgagcgcgctccagcgt
ttccttgagcttatcgaggcgctggcccatgaaaccatcgatatgccgctacatgtccag
accgatcgggtgattaaagattccggtttgtggctgatgtatgagcaagagaaaggcgag
aaaggccaggcccgcatcgaaaacttagaggaactggtgaccgcgacgcgccagttcagc
tacaacgaagaagacgaagatttaatgccgctgcaggcatttttgtcccatgcagcactt
gaggcgggcgaagggcaggctgatgcctggcaggacgcggtgcaactgatgacgctgcac
tccgccaaagggctggagttcccgcaggtgtttatcgtgggtatggaagaagggatgttc
ccaagccagatggcgctggatgaaggcggccgtctggaggaagaacggcgtctggcctat
gtgggcgttacccgcgccatgcagaagctgacgctgacctatgcggaaacccgtcgtctg
tatggtaaagaggcctatcatcgcccgtcgcgttttattgccgaactgccggagggctgc
gtggaagaggtgcgcctgcgcgcaagtattagccgtcctgtcagccataaacagctgggc
gcgccggttacgcagaacgattctggttataagcttggccagcgggtacgccacccgaaa
ttcggcgaaggcacgatagtcaaccttgaaggcagcggcgaacacagtcgcctgcaggta
gcgttcaacggacaagggattaaatggctggtggcggcctacgcccggctggaaaccgtc
tga
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