Cronobacter condimenti: AFK62_02110
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Entry
AFK62_02110 CDS
T04060
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
ccon
Cronobacter condimenti
Pathway
ccon02020
Two-component system
ccon02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ccon00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AFK62_02110
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AFK62_02110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccon03021
]
AFK62_02110
Transcription machinery [BR:
ccon03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AFK62_02110
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
ALB61371
UniProt:
K8A0H4
LinkDB
All DBs
Position
complement(454823..456262)
Genome browser
AA seq
479 aa
AA seq
DB search
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALESNPLLEQTDIHDEIATQE
TRDSEGLDTAEALEQKEMPDELPLDASWDEIYTAGTPSGTGADYIDDELPVYQGETTQSL
QDYLMWQVQLTPFTDTDRAIATAIVDAVDDTGYLTVSVQDILDGMGDSDGDIGPEEIEAV
LKRVQRFDPVGVAARDLRDCLLIQLSQFSAETPFLAQARQIVSDHLDLLANHDFRSLMRV
TRLKEEVLKEAVNLIQSLDPRPGQSIQTGEPEYVIPDVLVRKHNERWSVELNSDSIPRLK
INQQYAAMSNSTRNESDNQFIRSNLQEAKWLIKSLESRNDTLLRVSRCIVEQQQAFFEQG
EEYMKPMVLADIAQAVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASST
AIRALVKKLIAAENPAKPLSDSKLTSMLSEQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaggtttgcaactaaggcttagccaacagctcgccatgacgccgcagttgcag
caggccatccgcttgttgcaattgtctacgctggagctccagcaggagctgcaacaggcg
ctggaaagtaatcccctgcttgagcaaaccgacattcacgacgaaattgccactcaggaa
acacgcgacagcgaagggctggataccgccgaagcgctggagcaaaaagagatgccggac
gagctgccgcttgatgcgagctgggacgagatctataccgcgggaacgccgtcaggcacc
ggcgccgactacatcgacgacgagcttcccgtctatcagggcgaaaccacgcaaagtctt
caggattacctgatgtggcaggtgcagctgaccccttttacggacaccgatcgcgcaatc
gctacggcgattgtcgacgcggtagatgatacgggttacctcaccgtctcagtgcaggat
attctcgacggcatgggcgacagcgatggcgacatcggcccagaagaaatagaagccgtc
ctcaagcgcgtacagcgtttcgaccctgttggcgtcgcggctcgcgatctgcgcgactgc
ctgttaatccagctgtcacaattcagcgccgaaacacccttccttgcgcaggcgcgccag
attgtcagcgatcatctcgatctgttagctaatcacgatttccgcagtctgatgcgtgtt
acgcggctgaaagaagaggtgctgaaagaggcggtgaatctgatccagtcgctcgatccg
cgccccgggcagtcgatccagactggcgagccggaatacgtcattcccgacgtgctggtg
cgcaagcataacgaacgctggagcgtcgagcttaattccgacagcattccgcgcctcaaa
atcaatcagcagtacgccgcgatgtctaacagcacgcgcaatgaatcagataaccagttc
atccgcagcaacctgcaagaagcaaaatggcttatcaaaagcctggagagccgtaacgac
acgctgctgcgcgtcagccgttgtatcgtcgaacagcaacaggcgttcttcgagcagggc
gaagagtatatgaagccgatggtgctcgccgatatcgcccaggcggtagaaatgcacgaa
tccaccatctcccgcgtcaccacgcaaaaatatctgcacagcccgcgcggcattttcgaa
ttaaagtatttcttctcaagccacgtaaacaccgagggcggcggcgaagcctcgtctacg
gctattcgcgcgctggtgaagaagttgattgcagcggaaaaccccgcgaaacccctaagc
gacagcaagctgacgtctatgctgtcagaacaagggatcatggtggcccgccgtaccgtt
gcgaagtatcgagagtctttatccataccgccgtcaaatcagcgcaaacagctggtctga
DBGET
integrated database retrieval system