KEGG   Cronobacter condimenti: AFK62_02110
Entry
AFK62_02110       CDS       T04060                                 
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
ccon  Cronobacter condimenti
Pathway
ccon02020  Two-component system
ccon02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:ccon00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    AFK62_02110
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    AFK62_02110
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccon03021]
    AFK62_02110
Transcription machinery [BR:ccon03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AFK62_02110
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID
Other DBs
NCBI-ProteinID: ALB61371
UniProt: K8A0H4
LinkDB
Position
complement(454823..456262)
AA seq 479 aa
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALESNPLLEQTDIHDEIATQE
TRDSEGLDTAEALEQKEMPDELPLDASWDEIYTAGTPSGTGADYIDDELPVYQGETTQSL
QDYLMWQVQLTPFTDTDRAIATAIVDAVDDTGYLTVSVQDILDGMGDSDGDIGPEEIEAV
LKRVQRFDPVGVAARDLRDCLLIQLSQFSAETPFLAQARQIVSDHLDLLANHDFRSLMRV
TRLKEEVLKEAVNLIQSLDPRPGQSIQTGEPEYVIPDVLVRKHNERWSVELNSDSIPRLK
INQQYAAMSNSTRNESDNQFIRSNLQEAKWLIKSLESRNDTLLRVSRCIVEQQQAFFEQG
EEYMKPMVLADIAQAVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASST
AIRALVKKLIAAENPAKPLSDSKLTSMLSEQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq 1440 nt   +upstreamnt  +downstreamnt
atgaagcaaggtttgcaactaaggcttagccaacagctcgccatgacgccgcagttgcag
caggccatccgcttgttgcaattgtctacgctggagctccagcaggagctgcaacaggcg
ctggaaagtaatcccctgcttgagcaaaccgacattcacgacgaaattgccactcaggaa
acacgcgacagcgaagggctggataccgccgaagcgctggagcaaaaagagatgccggac
gagctgccgcttgatgcgagctgggacgagatctataccgcgggaacgccgtcaggcacc
ggcgccgactacatcgacgacgagcttcccgtctatcagggcgaaaccacgcaaagtctt
caggattacctgatgtggcaggtgcagctgaccccttttacggacaccgatcgcgcaatc
gctacggcgattgtcgacgcggtagatgatacgggttacctcaccgtctcagtgcaggat
attctcgacggcatgggcgacagcgatggcgacatcggcccagaagaaatagaagccgtc
ctcaagcgcgtacagcgtttcgaccctgttggcgtcgcggctcgcgatctgcgcgactgc
ctgttaatccagctgtcacaattcagcgccgaaacacccttccttgcgcaggcgcgccag
attgtcagcgatcatctcgatctgttagctaatcacgatttccgcagtctgatgcgtgtt
acgcggctgaaagaagaggtgctgaaagaggcggtgaatctgatccagtcgctcgatccg
cgccccgggcagtcgatccagactggcgagccggaatacgtcattcccgacgtgctggtg
cgcaagcataacgaacgctggagcgtcgagcttaattccgacagcattccgcgcctcaaa
atcaatcagcagtacgccgcgatgtctaacagcacgcgcaatgaatcagataaccagttc
atccgcagcaacctgcaagaagcaaaatggcttatcaaaagcctggagagccgtaacgac
acgctgctgcgcgtcagccgttgtatcgtcgaacagcaacaggcgttcttcgagcagggc
gaagagtatatgaagccgatggtgctcgccgatatcgcccaggcggtagaaatgcacgaa
tccaccatctcccgcgtcaccacgcaaaaatatctgcacagcccgcgcggcattttcgaa
ttaaagtatttcttctcaagccacgtaaacaccgagggcggcggcgaagcctcgtctacg
gctattcgcgcgctggtgaagaagttgattgcagcggaaaaccccgcgaaacccctaagc
gacagcaagctgacgtctatgctgtcagaacaagggatcatggtggcccgccgtaccgtt
gcgaagtatcgagagtctttatccataccgccgtcaaatcagcgcaaacagctggtctga

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