Cronobacter condimenti: AFK62_02295
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Entry
AFK62_02295 CDS
T04060
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ccon
Cronobacter condimenti
Brite
KEGG Orthology (KO) [BR:
ccon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccon03016
]
AFK62_02295 (truB)
Enzymes [BR:
ccon01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AFK62_02295 (truB)
Transfer RNA biogenesis [BR:
ccon03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AFK62_02295 (truB)
Prokaryotic type
AFK62_02295 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ALB61404
UniProt:
K8A1B5
LinkDB
All DBs
Position
486324..487268
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDVHGVLLLDKPQGLSSNDALQKVKRLYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIARLGQRTDTSDADGTVVEERPVTFSPQDLQDALECFRGDTL
QIPTMFSALKYQGKPLYEYARQGIEVPREARPITVYELLFIRHEGNELELEVHCSKGTYI
RTIIDDLGEKLGCGAHVTYLRRLTVSKYPLERMVTLEQLNTLLEEAQQKAIAPSDLLDPL
LMPMDSPASDYPLVNLPLTSSVYFKNGNPVRTSDAPSEGLVRVTEGDTEKFIGMGEIDSE
GRVAPRRLVVEYPV
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgcggtcgcgatgtgcatggcgtgttgctgctggataagccg
caggggctttcttccaacgatgcgctgcaaaaagtaaaacgtctctataacgcaaatcgt
gctggacacaccggcgcgctggatccgctggcgaccggcatgctgccgatttgtcttggc
gaagcgactaagttttcacaatatttgcttgattctgacaagcgatatcgcgtcattgct
cgtctgggccagcgcaccgacacttctgatgccgatggtacggtggtagaagaacggccc
gttacattcagtcctcaggatttacaggatgcgctggagtgctttcgtggcgacacgctg
caaataccaacgatgttctcagcactgaaatatcagggtaaaccgctatatgaatacgcg
cgtcagggtattgaagtgccgcgtgaagcgcgtccgatcactgtttatgagctgctgttt
attcgtcatgaaggcaatgagctggaactggaagtgcattgctcgaaaggcacttatatc
cgtaccatcattgatgacttaggcgaaaaacttggctgtggcgcgcatgtaacgtatctg
cgccgtctgacggtcagcaaatatcctctagagcgaatggtgacgcttgagcagttgaat
acgctgcttgaagaagcgcaacagaaggcgattgccccctctgatttgctcgacccgttg
ttaatgccgatggacagtcccgcgtcggactatccgctggtcaacttacccttaacgtcg
tccgtttacttcaaaaacggcaatccggtgcgcaccagcgatgcgccgtctgaaggtctc
gttcgcgtgacggaaggcgacacagaaaagtttatcggtatgggcgaaattgacagcgaa
ggtcgcgtcgcgccccgtcgactggtggtggagtatccggtttaa
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