Cronobacter condimenti: AFK62_02835
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Entry
AFK62_02835 CDS
T04060
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ccon
Cronobacter condimenti
Pathway
ccon00040
Pentose and glucuronate interconversions
ccon01100
Metabolic pathways
ccon02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ccon00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
AFK62_02835
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AFK62_02835
Enzymes [BR:
ccon01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
AFK62_02835
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Motif
Pfam:
Pectate_lyase_2
Beta-AFase-like_GH127_cat
Motif
Other DBs
NCBI-ProteinID:
ALB61501
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Position
complement(603222..604931)
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AA seq
569 aa
AA seq
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MRISTIALAVGLISLFSFNAAAQESARLESVKAFADTVFEKAGDRYGHSVPLLANGVDPR
TGKQLEWVFPDGKRAVLSNFSAQQNLMRVLVGLTNLTGDARYKQRAEENVRYYFDHYQDE
SGLLLWGGHRFVDLRTLEQQGPSEKELVHELKNAYPYYDLMFGVDSAATTRFIKAFWNAH
VYDWKTLETSRHGQYGKPMGKLWESDFEQQPPFFATKGLSFLNAGNDLIYSAGMLYEHDH
DAGALTWAKRLAEQYVLPRDKKTGLGVYQFTQPLKRADTTDDTDTNSKYGDRAQRQFGPE
LGPDALEGNMLLKGRTSTLYSENALMQLALAKSLGRDGNDLKKWTLDGLKAFATYAYNEK
TNTLRPMLANGTDLSGYTLKRDGYYGKKGTTLQPYPAGDEFLLSYARAWTLEQDPVLWTV
ARGIARGQGLGDIGSPGGADHKLNMDTDNHEPYAIFALIDLWQASGQKAYLTLADRIADN
ILKTRRVNGFFMDNPQAEYASIDNIAPYALLALEAAFEDKPGAVAPFLNGAGFTEGAYLM
PDGTVRYSTRDDELFALKPGEQLKPNGKK
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgagaatttcaactattgcgctggccgtggggttaatcagtctgttttcctttaacgcc
gcggcgcaggagagcgcgcgccttgagagtgttaaagcgtttgccgataccgtatttgag
aaagcaggcgatcgctacggccattcggtaccattgctggcgaacggcgttgatccccgt
accggcaaacaactggagtgggtatttcccgacggcaagcgagccgtgctgtcaaatttc
tcggctcagcagaatcttatgcgcgtcctggtcgggctcactaacctgaccggtgacgcc
cgttataaacagcgtgcggaagagaatgtccgttattattttgaccactatcaggacgaa
agcggcctgttgttatggggcggacaccgttttgtggacttacgaactctggagcagcaa
ggccccagcgaaaaagagcttgttcatgaactcaaaaacgcctacccctattacgacctg
atgtttggtgtcgatagcgcggcgactacccgctttatcaaagcgttctggaatgcccat
gtttatgactggaaaacgctggaaaccagccgccacggtcagtacggcaaaccgatgggc
aagctgtgggagagcgattttgagcaacagccgccgtttttcgccactaaagggctgagt
ttcctcaatgccggcaacgaccttatctattccgccggcatgctctacgaacatgaccat
gacgcgggcgcgctgacgtgggcgaagcggcttgccgagcaatacgtactgccgcgcgat
aaaaaaaccgggcttggcgtgtatcagttcacacagccgttgaaacgcgccgatacgaca
gacgataccgacaccaactcaaaatatggcgaccgcgcccagcggcagtttggcccggaa
ctcggcccggacgcgctggaaggcaatatgctgctgaaaggccgaaccagcacgctctat
tccgagaatgcgctgatgcagctggcgctggcaaaatcgcttggcagggacggcaacgac
ctgaaaaaatggacgctcgacggtcttaaagccttcgccacgtatgcctacaatgaaaaa
actaacaccttgcgcccgatgcttgcgaatggcaccgatctttctggctatacgcttaaa
cgagacggctattacggtaaaaaaggcaccacgctgcaaccttacccggcgggagatgag
tttttactttcgtatgcccgcgcctggacgctggagcaagatcccgtcctctggaccgtc
gcgcgcggcattgctcgcggccagggcctgggtgacatcggcagccccggcggcgccgac
cataagctcaacatggacaccgacaatcacgagccgtatgcgattttcgcgctgattgac
ctgtggcaggcgagcggacagaaggcgtatctgacgctggcagaccgcatcgcggataac
atcctgaaaacccgtcgcgtgaacggtttctttatggacaacccgcaagcggaatacgcc
agtatcgataacatcgcaccttatgccctgctggcgctggaagcagcctttgaggacaaa
cccggcgcggtggcaccgttcctgaacggcgccggattcaccgaaggcgcttacctgatg
ccagacggcaccgtgcgctattccacccgcgacgatgaactcttcgcgcttaaacccggt
gaacaacttaaacctaacggtaaaaagtga
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