Cronobacter condimenti: AFK62_03520
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Entry
AFK62_03520 CDS
T04060
Name
(GenBank) ATP-dependent helicase
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
ccon
Cronobacter condimenti
Brite
KEGG Orthology (KO) [BR:
ccon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccon03021
]
AFK62_03520
Transcription machinery [BR:
ccon03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
AFK62_03520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
AAA_34
Flavi_DEAD
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
ALB61627
LinkDB
All DBs
Position
complement(761099..764005)
Genome browser
AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVAIDARMVTLLFPATGENRLYARNDSPVTRVMFNPGDT
VTSHEGWQLKVDEVKEENGLLIYIGTRLDTLEENVTLREVFLDSKLVFSKPQDRLFAGQI
DRMDRFSLRFRARKYQSEQYRMPWSGLRGQRTNLIPHQLNIANDVGRRHAPRVLLADEVG
LGKTIEAGMIIHQQLLSGAAERVLIVVPETLQHQWLVEMLRRFNLRFSLFDDERYTEAQH
ESDNPFDTEQLVICSLDFVRRNKQRLEHLCDAEWDLLVVDEAHHLVWSEDAPSREYQAIE
QLAERVAGVLLLTATPEQLGMESHFARLRLLDPNRFHDFEQFVEEQQNYRPVADAVALLL
AGTHLSDEQLNTLSELIGEQDIEPLLQTANSDRDGAEAARQELVSMLMDRHGTSRVLFRN
TRNGVKGFPQRELHTIKLPLPTQYQTAIKVSGIMGARKTAEERARDMLYPEQIYQEFEGD
SGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSI
IERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASQLVMFDLPFNPDLLEQRIGRLDRI
GQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRAIYDSVYEQLIGYLAAPEND
EGFDDLIKACRKQHDELKAQLEQGRDRLLEIHSNGGEKAQQLADTIAEQDDDTGLVNFAM
NLFDIVGINQDDRGEHMIVLTPSDHMLVPDFPGLPEDGCTITFNRDVALSREDAQFITWE
HPLIRNGLDLILSGDTGSCTISLLKNKALPVGTLLLELIYVVEAKAPKQLQLNRFLPPTP
VRMLLDKNGTNLAGQVEFESFNRQLSAVNRHTGSKLVNAVQQEVHAILQGGEAQVEKAAR
ALIDAARQEADDKLSAELSRLEALRAVNPNIRDDELAAIEHNRQQVLENLNQASWRLDAL
RLIVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcaacgctggatcagcgatacggagagcgaactgggactgggc
accgttgtggcgattgacgcccgcatggtgacactgcttttcccggctaccggtgaaaat
cgtctgtatgcccgaaatgactccccggtcacccgcgtaatgttcaacccgggcgatacc
gtgaccagccatgaaggctggcagttgaaagtggatgaagtaaaggaagaaaacggctta
cttatctatatcggcacgcgtctggatacgcttgaggaaaatgtcacgctgcgcgaagtg
ttcctcgacagcaagctggtgttcagcaaaccgcaggaccgcctgttcgcaggccagata
gaccgcatggaccgcttctccctgcgctttcgcgcccgcaaataccagagcgaacagtac
cggatgccgtggagcggcctgcgcggccagcgtaccaatctgatcccgcaccagctcaat
atcgccaacgatgtgggccgccgtcatgcgccgcgcgtgctgctggcggatgaagtgggt
cttggcaaaaccatcgaagccgggatgatcattcatcagcaactgctttccggagctgcc
gagcgtgtgctgattgtcgtgccggaaacgctgcaacaccagtggctggtagagatgctg
cgccgcttcaacctgcgcttctcgctgtttgatgacgagcgctataccgaagcgcagcat
gaatctgacaacccgttcgataccgaacagctggttatctgctcgctcgatttcgtgcgc
cgcaacaaacagcgccttgagcatctctgtgatgccgaatgggatctgctggtagtggac
gaagcgcaccacctggtgtggagtgaagatgcgccaagccgcgaatatcaggccattgaa
caactggccgaacgcgtggcaggcgtgctgctgctgaccgcaacgccagagcagctcggg
atggaaagccacttcgcgcgcctgcgtctgctggacccgaaccgcttccacgatttcgaa
caatttgtcgaagaacagcagaactaccgcccggtggcggacgccgtcgcgttgctgctg
gccgggacgcatcttagcgatgaacagctcaacacattaagcgagctgattggcgagcag
gatatcgagccgctgctgcaaaccgcgaacagcgaccgtgacggcgccgaggccgcgcgt
caggaactggtctcaatgctgatggaccgccacggcaccagccgcgtcctgttccgcaac
acccgtaacggcgtgaaaggcttcccgcagcgcgaattacacaccattaagctgccgttg
ccgacccagtaccagaccgccattaaggtttccggcatcatgggcgcgcgtaaaaccgct
gaagaacgcgcccgcgatatgctctacccggaacagatttatcaggagttcgaaggcgac
agcggcacctggtggaacttcgacccgcgcgtggagtggctgatgggctatctcacaagc
catcgctcgcaaaaagtgctggttatctgcgcgaaggccgccaccgcgcttcaactggag
caggtgctgcgcgagcgcgaaggcatccgtgccgccgtgttccatgaagggatgtcgatt
atcgaacgtgaccgcgcggcggcctggtttgcagaagaagataccggcgcacaggtgctg
ctctgctcggaaatcggctctgagggccgtaacttccagttcgcaagtcagctggtgatg
tttgacctacccttcaacccggatctgctggagcagcgtatcggccgtcttgatcgtatt
ggccaggcgcacgacattcagatccatgtgccgtacctcgaaaaaaccgcgcagtcagtg
ctggtgcgctggtaccacgaaggtctcgatgcgttcgagcacacctgtcccaccgggcgt
gcgatttacgacagcgtttacgaacagttgattggttatctggccgcgccggaaaacgac
gagggctttgacgatctcatcaaggcatgtcgcaagcaacacgatgagctgaaagcgcag
cttgagcagggccgtgaccgtctgctggagatccactccaacggcggcgaaaaagcgcag
cagttggccgacaccattgcggaacaggatgacgacacgggtctggtgaatttcgccatg
aacctgttcgatatcgtggggattaaccaggacgatcgcggcgaacatatgattgtgctg
acgccttccgatcatatgctggtgccagatttcccgggcctgccggaagatggctgcacc
attacgtttaaccgcgacgtggcgctgtcgcgcgaagacgcgcagttcattacctgggag
catccgcttattcgcaacggtctggatcttatcctttccggcgataccggtagttgcacg
atttcgctcctgaaaaacaaagcgttgccggtgggcacgctgctgctggagcttatctac
gtggtggaagccaaagcgccgaagcagttgcagttaaaccgcttcctgccgccaacgccg
gtgcgcatgctgctcgataaaaacggcactaacctcgcaggtcaggtggagtttgaaagc
ttcaaccgccaattaagtgccgtcaatcgccataccggcagcaagctggtgaatgcggtg
cagcaggaagttcacgccattttgcaaggtggcgaagcccaggtggaaaaagccgcacgc
gcacttatcgacgcagcgcgccaggaagccgacgataaactgtctgccgagctttcccgc
ctcgaagcgctgcgtgcggtaaacccgaacattcgcgacgacgaactggcggcaatcgaa
cacaatcgccagcaggtgctggagaatctcaaccaggcgagctggcgtctggatgcgctg
cgtcttatcgtggtgactcaccagtaa
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