Cronobacter condimenti: AFK62_06365
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Entry
AFK62_06365 CDS
T04060
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ccon
Cronobacter condimenti
Pathway
ccon03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AFK62_06365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccon03400
]
AFK62_06365
DNA repair and recombination proteins [BR:
ccon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AFK62_06365
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AFK62_06365
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
SBDS_domain_II
UB2H
Kinesin
AAA_22
IF2_N
DUF8810
Microtub_bd
DUF87
Motif
Other DBs
NCBI-ProteinID:
ALB62144
UniProt:
K8A4G9
LinkDB
All DBs
Position
1384930..1386951
Genome browser
AA seq
673 aa
AA seq
DB search
MSKPFKLNSAFKPSGDQPEAIRRIKEGLEDGLAHQTLLGVTGSGKTFTMANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTKGMIIDQRAILRRLTELQ
YTRNDQAFQRGTFRVRGEVIDIFPAESDDLALRVELFDEEVERLSLFDPLTGTVDSIIQR
FTVYPKTHYVTPRERIVQAMEEIKVELAERRKVLLENNKLLEEQRLTQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEAPPTLFDYLPADGLLVVDESHVTIPQIGGMFRGDRARKET
LVEYGFRLPSALDNRPLKFEEFEALAPQTVYVSATPGNYELEKSGGDIIDQVVRPTGLLD
PIIEVRPVATQVDDLLSEIRKRVAINERVLVTTLTKRMAEDLTEYLEEHGEKVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNVNGKAILYGDKITPSMAKAIGETERRREKQQIYNEEHGIVPQGLNKKVVDILALG
ENIAKTKPKGRGKGRSVVDAEAAELALTPKALQQKIHQLEAQMVQHAQNLEFEEAAQVRD
KLHQLRELFIAAS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaccgttcaaactcaattccgctttcaaaccttctggcgatcagcctgaggcg
attcgtcgcatcaaggaagggctggaggacggactggcgcaccagacgctgctgggggtg
acgggctcagggaaaaccttcaccatggcgaacgttatcgccgatttgcagcgcccgaca
atggtgctggcgcccaataaaacgctggcggcgcagctctacggcgaaatgaaagagttc
tttcctgaaaacgccgtcgagtatttcgtctcttactacgattactaccagccggaagcc
tatgtgccgagctctgacacgtttatcgagaaggacgcgtcggtaaacgagcacatcgaa
cagatgcgtctgtcggcaaccaaagcgctgctggagcggcgcgatgtggtcgtggtggcg
tcggtttctgctatctacggtctgggcgacccggatctctacctgaagatgatgctgcat
ctcaccaaagggatgatcatcgatcagcgcgccattctgcggcggctgacggagctgcaa
tatacccgcaacgatcaggcgttccagcgcggcactttccgcgtacgcggcgaggtcatc
gacattttcccggcggaatcggacgatctggcgctgcgcgtcgaactgtttgatgaagag
gtggagcggttatcgttgtttgacccactgactggcaccgtcgactctattatccagcgc
tttacggtctacccgaaaacgcactacgtcaccccgcgcgagcgtattgtgcaggcgatg
gaagagatcaaagttgagctggcggagcgccgcaaggtgctgcttgaaaacaataagctg
ctggaagagcaacgcctgacccagcgtacgcagtttgacctcgaaatgatgaacgagctg
ggttattgctcgggcattgaaaactactcgcgctatctctcgggccgtgggccgggcgag
gcgccgccaaccctctttgactacctgccggcggatggcctgctggtggtggacgaatcc
cacgttactattccgcagattggcgggatgttccgtggcgaccgcgcgcgtaaagagacg
ctggtggaatatggcttccgtttgccatcagcgctggataaccgcccgctgaaatttgaa
gaattcgaagcgctggcgccgcagaccgtgtatgtgtcggcgacgccgggcaactatgag
cttgagaaatcgggcggtgacattatcgatcaggtggtgcgtccgacgggcctgctcgac
ccgattatcgaagtacgcccggtagcaacgcaggtggacgatctgctttcagaaatccgc
aagcgtgtcgccatcaacgaacgtgtgctggtaacgaccctcaccaaacgtatggcggaa
gatttaaccgaatatctcgaagagcatggcgagaaggtgcgctacctgcactctgatatt
gataccgtcgagcgcatggaaattatccgcgaccttcgtcttggcgagtttgacgtgctg
gtgggcattaacctgttgcgagaaggactggatatgccggaagtctcgctggtggcgatt
ctggatgccgacaaagaggggttcctgcgttccgagcgctcgctcattcagactatcggg
cgtgcggcgcgtaacgtgaacggcaaagccattctgtatggcgataaaattacgccatcg
atggcgaaggcaattggcgaaaccgagcgccgccgtgagaagcagcagatttacaacgaa
gagcacggtatcgtgccgcaggggctgaacaagaaagtggtcgatattctggcgcttggc
gagaatatcgcaaaaaccaagccgaaaggccgtggcaaaggccgcagtgtggtggatgct
gaagctgctgaactggcgctcacgccaaaagcgttgcaacagaagattcaccagctcgaa
gcgcaaatggtgcaacatgcccagaatctcgagtttgaagaggcagcccaggtgcgtgac
aaactgcatcagcttcgcgaactgtttatcgccgcgtcgtag
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