Cronobacter condimenti: AFK62_06450
Help
Entry
AFK62_06450 CDS
T04060
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ccon
Cronobacter condimenti
Pathway
ccon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AFK62_06450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccon03019
]
AFK62_06450
Enzymes [BR:
ccon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AFK62_06450
Messenger RNA biogenesis [BR:
ccon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AFK62_06450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
DUF6426
P-loop_SecA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ALB62160
UniProt:
K8A3N3
LinkDB
All DBs
Position
1401519..1402943
Genome browser
AA seq
474 aa
AA seq
DB search
MSFDSLGLSPEILRAIAEQGYNEPTPIQRQAIPVVLSGKDLMASAQTGTGKTAGFTLPLL
QRLTANEPQKGRRPVRALILTPTRELAAQVGENVREYSKYLDIRSLVVFGGVSINPQMMK
LRGGVDVLIATPGRLLDLEHQNAVKLDQVEVLVLDEADRMLDMGFIHDIRRVLAKLPPKR
QNLLFSATFSDDIKGLAEKLLRNPEEVAVARRNTASGQVTQHVHFVDKKRKRELLSYLIG
DGNWQQVLVFTRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALADFKTGGIRVLVA
TDIAARGIDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIE
RVLKREIPRMAIPGYEPDPSIPAEPIVNGRQGGRGGRGGQGGGGRSQGQPRRQDGAGNRA
SGERSRPSGERARRQDGESSRPSGDRPRRPAGEGNRPAGNKPRTRRAPRKAGGE
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattcactgggcttaagccctgagatcctgcgcgccattgccgagcagggt
tacaacgaaccgactccgatccagcgccaggctattccggtggtgctttcaggtaaagat
ctgatggccagtgcccagaccggcaccggcaaaaccgcaggcttcacgctgccactgctg
cagcgtctgacggcgaacgagccgcagaagggccgtcgcccggtgcgtgcgctgatcctg
accccgacgcgcgaactggcagcccaggtgggcgagaacgtgcgtgaatacagcaaatac
ctcgatatccgctcgctggtcgtctttggcggcgtgagcatcaacccgcagatgatgaaa
ctgcgcggcggcgtggatgtgcttatcgcaacgcctggccgcctgctggatctggaacac
cagaacgccgtcaagctcgaccaggtggaagtcctggtactggacgaagctgaccgtatg
ctggacatgggctttatccatgacattcgccgcgtgctggcgaagctgccgccgaagcgt
cagaacctgctgttctccgcgaccttctccgacgacatcaaagggctggccgaaaaactg
ctgcgcaacccggaagaagtggccgtggcgcgccgcaacaccgcctccgggcaggtgacg
cagcatgtgcatttcgtggataaaaaacgcaaacgggaactgctttcttacctgattggc
gatggcaactggcagcaggtgctggtgtttacccgcaccaagcatggcgctaaccatctg
gccgagcagctgaacaaagacggcatcaccgccgcggctatccacggcaacaagagccag
ggcgcccgtacccgcgcgctggcagacttcaaaaccggcggcattcgcgtgctggtggcg
accgatatcgctgcgcgcggtattgatatcgaagaactgccgcacgtagtgaactacgag
ctgccgaacgtgccggaagattacgttcaccgtatcggccgtaccgggcgcgcggccgcg
accggcgaggcgctctcgctggtgtgcgtcgacgagcacaaactgctgcgtgatatcgaa
cgcgtgctgaagcgtgaaattccgcgcatggcgatcccgggctacgagccggacccgtct
atcccggcagagcctatcgttaatggtcgccagggcggccgtggcggacgtggtggtcag
ggcggcggtggtcgtagtcagggccagccgcgtcgtcaggatggcgcgggtaaccgcgct
tctggcgagcgcagccgtccgtccggtgagcgagcgcgccgtcaggatggcgaaagcagc
cgtccgtcaggcgaccgtccgcgtcgtccagcgggcgaaggcaaccgtccggcaggcaat
aaaccgcgcacccgtcgcgcgccgcgtaaagcgggtggggaataa
DBGET
integrated database retrieval system
