Cronobacter condimenti: AFK62_06660
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Entry
AFK62_06660 CDS
T04060
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ccon
Cronobacter condimenti
Brite
KEGG Orthology (KO) [BR:
ccon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccon03009
]
AFK62_06660 (rimO)
Enzymes [BR:
ccon01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
AFK62_06660 (rimO)
Ribosome biogenesis [BR:
ccon03009
]
Prokaryotic type
ribosomal protein modification factors
AFK62_06660 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
RNase_II_C_S1
CLP1_P
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
ALB62200
UniProt:
K8A5W8
LinkDB
All DBs
Position
complement(1455824..1457149)
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AA seq
441 aa
AA seq
DB search
MSNVMQQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPRYDDADMVIVNTCGFIDSAV
QESLEAIGEALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLQHVHHYVPKP
KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLDSRPIGDVLAEAKR
LVEAGVKELLVISQDTSAYGVDVKHRTGFWNGSPVKTSMVSLCEQLAKLGVWVRLHYVYP
YPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICPELTL
RSTFIVGFPGETEDDFQMLLDFLKEARLDRVGCFKYSPVEGATANELADQVPEEVKEERW
NRFMALQQQISAERLQEKVGREILVIIDEVDDEGAIGRSMADAPEIDGAVYLNGETTLKP
GDVVRVKVENADEYDLWGSLV
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatgtaatgcagcagccgaagattggcttcgtttctcttggctgtccgaaaaac
ctggtggactctgagcgcatcctgaccgagcttcgcaccgagggctatgacgtggtgcca
cgctatgacgacgccgatatggttatcgtcaatacctgcggctttatcgacagcgcggtg
caggagtcgctggaggcgatcggcgaggcgctgaacgaaaacggtaaggtaattgtgacc
ggctgtcttggcgctaaagaagatcagatccgcgaagtgcacccgaaggtgctggagatc
accgggccgcacagctacgagcaggtgctgcaacatgttcatcattatgtgccgaaaccg
aagcataacccgttcctgagtctggtgccggaacagggcgtgaagctgacgccacgccac
tatgcgtacttaaaaatttccgaaggctgcaaccatcgctgcaccttctgcattattcct
tcgatgcgcggcgatctcgacagccgtccgattggcgacgtgctggccgaagcgaaacgc
cttgtggaagcgggcgtgaaagagctgctggtgatttcgcaggatacgtccgcctatggc
gttgacgtcaaacaccgcaccggtttctggaacggttcgccggtgaaaaccagcatggtg
agcctgtgcgaacagctcgcgaagctcggcgtctgggtgcgtctgcactatgtgtaccca
tacccgcacgttgacgatgtgatcccgctgatggcggaaggcaaaatcctgccgtatctc
gatattccgctgcaacacgccagcccgcgtatcctcaaactgatgaagcgtccgggctcg
gttgaccgccagctggcgcgcatcaagcagtggcgcgaaatctgcccggaactgaccctg
cgttcgacctttattgtcggcttccctggcgaaactgaagacgatttccagatgctgctg
gatttcctgaaagaggcgcgtctggatcgcgtgggctgctttaagtacagcccggtcgaa
ggcgcaaccgccaacgagctggcggatcaggtaccggaagaagtaaaagaggagcgctgg
aaccgctttatggctttgcagcagcagatctccgccgagcgtttgcaggaaaaagtcggc
cgcgagatcctggtcatcattgatgaagtggatgacgagggcgcgattggccgcagcatg
gccgatgccccggaaatcgacggcgcggtgtacctgaatggtgaaaccacactgaagccg
ggcgacgtggtgcgcgtgaaggtggaaaacgccgacgaatacgatttgtggggcagcctg
gtttaa
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