Cronobacter condimenti: AFK62_09570
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Entry
AFK62_09570 CDS
T04060
Name
(GenBank) type IV secretion protein Rhs
Organism
ccon
Cronobacter condimenti
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
DUF4595
UPF0257
OCRE
YL1_C
Motif
Other DBs
NCBI-ProteinID:
ALB62736
LinkDB
All DBs
Position
2089348..2093457
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AA seq
1369 aa
AA seq
DB search
MHSGAHFDPQLGLDIHLYPWPLPTPHIGLVFDVFDYLPFIGTTVHVNGIRRASAGTGGIA
IHIPTGGAWVPPLRLPGGPQLEDELFMGSKTVAVDGEPFSRIGMPVLSCNVVGMVPPFRP
KRAAKPKLPSLTLPLTFNLALPNNVIVGGPPTVNLMALLMRAGLSGLGKGMKKLKKTPQW
RLFMRRFTKFRQKLFRNMEPGFLKCRVLRAEPVDIRDGSVHLEHRDFLLPGRLPLDWGRF
YSSADINEEGLCGYGWLTPADTTLEVMRDDGVALLTEPEGVTLFVGLPQEPGREHAVFGL
PDGSRLWYELRDGEPCWQVEQESALCWQFTGRDGRLCVDAVADRNHNRWQFERDAGVLTR
LREFSAEGPTGREILVTCEQGRLQALRLRNASDGDVTPLTRYEYDETGQLVAEIDALSHP
RRFRYQQRRMISHVDRNGQGFHYTFDDAWRVVHAWGDGNVWDYRFEYHTLLNEVAVTDSL
GNLSRITFDDNGLPVSEIDPLGGNTVFRYDDVGRTLEVTEPDGSQHRWEYDAQGRMTAEH
LPGGGVVRAMFNDFGQPLCVTDESGAQWTSDYDAAGNLIVGCDPTGVSAHYVYDTLGQLR
EADVPGQPVTRYDYDRYGFLTLIAQAGTGETRLRHSLRGNLLEKRDASGGVTRYFWDMKD
RLVAMQTPEGQEIRVEYNREDEPVRYTDEVGRETRFIYNATGMVTACHTPDGTQTGYEYD
PEDRLLAVINQNGERWALARDALGRVVTETDYWGQATRYEWDKGDRLIRRLDPLEREVRY
GYDAAGRLRERRSGDTLTARYHYDDGGRLTLCENPWRRLAWRYDRAGRVLCEDQDGFQLR
YDYNARGLPVRRESDAGHRVAYTWDDDDRLIRVQLNDDAPVELRYDETGRLASEQLSPTL
RRAMAYDTQGRLTTQEVTQGDMPLFTSGFAYDRTGNMTRRQDSQWGDDRYRYDPVGRLVA
HSEPDGALRQFIHDAAGNHLHTHVQAVDDSPGGWFREGVHEGVRYVFDRAGELRQRRNLH
TGEAKEDFLWDENRQLIAVRKGEHQVRYGYDALGRRVFKQTPDETRWFYWQGDALAGETV
TRTAASLAPLSLFDTGGRIKREQAQAALFHRMREYVYYPGTFRPLALLTQEGSLRESWHY
HCDPNGAPVRLTSVCGEIVWAERTGAWGEKGKVFASRIDNPLRFQGQYFDPETGLHYNRY
RYYDPAIAAYIRQDPIGMLGGGNPYRYAPNPLMWIDPLGLSKFSPKDPGLAELIDAIESR
LPGAVKQVEIGIARPNGTLYTDLDIVTDTHVIQVKTGGGKGLVGQLETSKEITIGKEVVG
FDANSLIGSSKRVKPSIIKDATAKGFKVFDNVDDLISDMKLNPGTGKRC
NT seq
4110 nt
NT seq
+upstream
nt +downstream
nt
atgcactccggtgcccatttcgacccgcagctcggcctggatatccacctttacccgtgg
ccgctgccgacgccacatattggcctggtgttcgacgtcttcgactatttgccgtttatc
ggcaccacggttcacgtgaacggcatccgacgcgccagcgcgggcaccggcggcattgcg
attcatattcctaccggcggggcgtgggtaccgccgctgcgtttaccgggtggcccgcag
ctcgaagatgaactctttatgggcagcaaaaccgtggcggtggacggcgagccgttctcg
cgtatcgggatgccggtgctgagctgcaacgtcgtcggcatggtgccgccgttccggccc
aaacgcgccgccaaaccgaagctgccgtcgctgacgctgccgctgaccttcaacctggcg
ctgcccaataacgttatcgtcggcgggccgccgaccgtcaacctgatggcgctgctgatg
cgcgcgggcttaagcggcctcggcaagggcatgaaaaagctcaaaaagacgccccagtgg
cggctctttatgcgccggtttacgaagtttcgccagaaactgttccgcaatatggaaccc
ggatttcttaaatgccgggtgctgcgcgccgagccggtcgatattcgcgacggcagcgtc
catcttgagcatcgcgatttcctgctgccggggcggctgccgctcgactggggacgtttt
tactcctcggcggatattaacgaggaagggctgtgcggctacggctggctgacgcctgcc
gataccacgcttgaggtgatgcgcgacgacggcgtggcgctgctcaccgagccggaaggc
gtgacgctgttcgtcgggttgcctcaagagcctgggcgcgagcatgcggtgtttggtctg
ccggacggcagccgcctctggtatgaactgcgcgacggcgagccctgctggcaggtggag
caggagagcgcgctgtgctggcagtttaccggacgcgacgggcggctgtgcgtcgatgcc
gtggccgatcgcaaccacaaccgctggcagtttgaacgtgacgcgggcgtgctgacgcgc
ctgcgcgaattcagcgccgaaggcccgacggggcgcgagatcctcgtgacctgcgagcag
ggccgcttgcaggcgctgcggctgcgtaatgcgtcggacggcgacgtgacgccgctcacc
cgttatgaatatgacgagacgggccagctggttgcggaaatcgacgcgctctcgcatccc
cggcgctttcgctaccagcagcggcgcatgataagccacgtcgatcgtaacgggcagggg
tttcattacaccttcgatgacgcctggcgcgtggtgcacgcctggggcgacggcaacgtc
tgggattaccggttcgagtaccacacgctgcttaacgaagtcgcggttaccgattcgctc
ggcaacctctcgcgaatcacctttgatgacaacggcctgccggtgtccgagattgatccg
ctcggcggcaacacggtgtttcgctatgacgacgtaggccgcacgctggaagtgacggag
cccgacggcagccagcaccgctgggaatatgacgcacagggccggatgacggcggagcat
ctgccgggtggcggcgtggtgcgcgccatgttcaacgatttcggccagccgctgtgcgtc
acggacgagagcggcgcgcagtggacatcagactatgacgcggcgggcaatctcatcgtg
gggtgcgacccgacgggcgtgtctgcgcactacgtttacgatacgctcggccagctgcgc
gaggccgacgtgccgggccaacccgtaacgcgctacgactacgatcgctacggctttctg
acgcttattgcgcaggcgggcacgggcgaaacgcggctgcgccactcgctgcgcggtaat
ctgctggagaaacgcgacgcgagcggcggcgtcacccgttacttctgggatatgaaagac
aggctggtcgcgatgcagacgccggaggggcaggagatccgcgtcgagtacaaccgcgaa
gacgaaccggtgcgctataccgatgaagtcggccgcgagacgcgttttatctataacgcc
accggcatggtgacggcctgccacacaccggacggcacgcaaacgggttatgaatacgat
ccggaagaccgcctgctggccgttatcaaccagaacggcgaacgctgggcgctggcccgc
gacgcgctgggccgcgtggtgacggaaaccgattactggggccaggcgacacgctacgaa
tgggataaaggcgaccggctgatacgccgtctcgacccgctggagcgcgaggtgcgctac
ggctacgacgccgctggccgcctgcgggaacggcgcagcggcgacacgctcaccgcccgt
taccactacgacgacggcggccgcctgacgctgtgcgaaaacccgtggcggcggctcgcc
tggcgctacgaccgcgcaggccgcgtgctgtgtgaagatcaggacggttttcagctgcgc
tatgactataacgcgcgcggcctgccggtacggcgcgagagcgacgccgggcaccgggtg
gcctatacgtgggacgacgacgaccggctcattcgtgtgcagcttaacgacgacgcgcct
gtggagctgcgttatgacgagacgggcaggctcgcgagcgagcagctttcgccgaccctg
cggcgcgcgatggcgtatgacacacagggcaggctgacaacacaagaagtgacgcagggc
gacatgccgctgttcacaagcggtttcgcctacgaccgcaccgggaatatgacgcgacgg
caggacagccagtggggcgatgaccgctaccgttacgatccggtggggcgtctcgtggcg
cacagcgagcccgacggcgcgctgcgccagtttatacacgacgccgcgggcaatcatctg
cacacgcacgttcaggcggtggatgattcgccgggcggctggtttcgagaaggcgttcat
gagggcgtgcgttacgtcttcgaccgggcgggcgaactgcgccagcgccggaacctgcac
accggcgaggcgaaagaggatttcctctgggatgagaaccgccagctgattgcagtgcgc
aagggcgagcatcaggtgcgctacggctatgacgcgctcggacgccgcgtcttcaagcag
acaccggacgagacgcgctggttctactggcagggcgatgcgctggcgggcgaaacggtc
acgcgcacggcggcatcgcttgcgcccttaagcctcttcgacaccggcgggcgcatcaaa
cgcgagcaggcccaggcggcgctctttcatcggatgcgtgaatacgtctattaccccggc
actttccgcccgctggcgctcctgacgcaggagggatctctgcgggagagctggcactac
cactgcgatccgaacggcgcgccggtccgcctgacgtcggtctgcggggaaattgtctgg
gcggagcgcaccggcgcgtggggcgaaaaaggcaaggtttttgccagccgcatcgataac
ccgctgcgcttccaggggcagtatttcgacccggaaacgggtttacattacaaccgctac
cgttactatgatccggcgatagccgcctatatccgccaggacccgatagggatgctgggt
ggggggaacccgtatcgctacgctcctaatccattgatgtggattgaccctttgggatta
agtaaattctctcccaaagatccagggctagctgaattaatagatgctattgaatcaagg
ctaccaggtgcagtgaaacaagttgaaattgggatcgccaggcctaatggaactttatat
actgacttagatattgtaactgatacgcatgttattcaggttaagactggtggcggcaaa
ggactggtaggccagttagagaccagtaaagaaataacgattggcaaagaagttgttgga
tttgatgctaatagtctcattgggtcaagtaaaagagttaaaccctccattattaaagat
gcgacggccaagggtttcaaggtgtttgataatgtcgatgatctcatcagtgatatgaaa
ttaaacccaggcacaggaaaaaggtgttga
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