Cronobacter condimenti: AFK62_10600
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Entry
AFK62_10600 CDS
T04060
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ccon
Cronobacter condimenti
Brite
KEGG Orthology (KO) [BR:
ccon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccon03032
]
AFK62_10600
03400 DNA repair and recombination proteins [BR:
ccon03400
]
AFK62_10600
Enzymes [BR:
ccon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AFK62_10600
DNA replication proteins [BR:
ccon03032
]
Prokaryotic type
DNA Topoisomerases
AFK62_10600
DNA repair and recombination proteins [BR:
ccon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AFK62_10600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
ALB64764
LinkDB
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Position
complement(2324749..2327346)
Genome browser
AA seq
865 aa
AA seq
DB search
MGKALVIVESPAKAKTINKYLGKDYVVKSSVGHIRDLPTSGSAPKKSAESASTKTAKKVK
KDERGALVNRMGVDPWHNWEAQYEVLPGKEKVVSELQALAEKADHIYLATDLDREGEAIA
WHLREVIGGDETRYSRVVFNEITKNAIRQAFDKPGELNIDRVNAQQARRFMDRVVGYMVS
PLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEEFWEVDALLSTPKSDQLTVQVTH
HKDKPFRPVNRQDTEAAVAQLKGASYQVVEREDKPTSSKPGAPFITSTLQQAASTRLGFG
VKKTMMMAQRLYEAGYITYMRTDSTNLSQDAVSMVRSYIGEEFGKKYLPENPNQYASKEN
SQEAHEAIRPSDVSVLAESLKDMENDAQKLYQLIWRQFVACQMTPAQYDSTTLTVAAGDF
RLKARGRILRFDGWTKVMPALRKGDEDRTLPAVNQGDKLSLLELTPAQHFTKPPARFSEA
SLVKELEKRGIGRPSTYASIISTIQDRGYVRVENRRFYAEKMGEIVTDRLEENFPDLMNF
DFTAQMEDSLDQVANHEAEWRAVLDTFFDDFTKQLDTAEKDPEEGGMRPNQMVLTSIDCP
TCGRPMGIRTASTGVFLGCSGYALSPKERCKTTINLVPENEVLNVLEGDDAETNALRAKR
RCQKCGTAMDSYLIDPKRKLHVCGNNPTCDGYEVEEGEFRIKGYDGPVVECEKCGSEMHL
KMGRFGKYMACTNEECKNTRKILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVF
LAANTFPKSRETRAPLVEELQRFRDRLPEKLRYLADAPAQDPEGNPAVVRFSRKTKQQYV
ASEKEGKATGWSAFYVDGKWAEGKK
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagctctcgtcatcgttgagtccccggcaaaagccaaaacgatcaacaaatat
ctcggtaaagactacgtggtgaaatccagcgtcggtcacatccgtgatttgccgaccagt
ggctccgcccctaaaaaaagcgctgaatccgcctcgactaagacggctaaaaaagtcaaa
aaagatgaacgtggcgcgttagtcaaccgtatgggcgtcgacccgtggcacaactgggaa
gcccagtatgaagtgctacccggtaaagaaaaagtggtctccgagctgcaagcgcttgct
gaaaaagccgaccatatctatctcgcaaccgaccttgaccgcgaaggggaagccattgca
tggcacctgcgggaagtgatcggcggcgacgagacgcgttacagccgcgtcgtttttaat
gaaattaccaaaaatgccattcgccaggcttttgataaaccgggcgagctcaacatcgat
cgtgtgaatgctcagcaggcgcgccgttttatggaccgcgtcgtggggtatatggtttct
ccgctactgtggaagaaaatcgcccgcggtctgtctgcaggccgcgtacagtctgtggcc
gttcgcctggtggttgagcgcgagcgcgaaattaaagcgttcgtaccggaagagttctgg
gaagtggacgcgctgctgtcgaccccgaaaagcgatcagctcactgttcaggtcacgcat
cataaagataaaccgttccgcccggtaaaccgtcaggatactgaagcggcagtcgcgcag
ttaaaaggggcgagctaccaggttgtcgagcgggaagataaacccaccagcagcaaacct
ggcgcgccttttattacctctacacttcagcaggcagccagcacccgtctcggctttggc
gttaagaaaaccatgatgatggcccagcgtctttatgaagcagggtatattacttatatg
cgtactgactccacgaacctgagtcaggatgcggtaagcatggtgcgtagctatattggt
gaggagttcggtaagaagtacctgccggaaaacccgaaccagtacgccagcaaagagaac
tcccaggaagcgcatgaagccattcgtccttctgatgtaagtgtgctggcggaatctctg
aaagacatggaaaacgacgcgcagaagctctatcaactgatctggcgccagtttgtcgcc
tgtcagatgacgcctgcacagtatgactccaccacgctcaccgttgcggcgggggatttc
cgcctgaaggcgcgtggccgtatcctgcgctttgacggctggacgaaagtcatgcctgcg
ctgcgcaaaggtgatgaggacagaacgctgccggcggtaaatcagggcgataaactttct
ctgcttgaactgacgcctgcgcaacacttcaccaaaccgcctgcgcgctttagcgaagcg
tctttggttaaagaacttgagaaacgcggtatcggtcgtccttcaacctatgcttctatc
atttcgacaatccaggataggggctatgtacgtgtagaaaatcgccgtttctatgcagaa
aaaatgggtgaaatcgtcaccgatcgcctggaagaaaacttcccggatctgatgaacttt
gacttcaccgcgcagatggaagattcgctcgatcaggtagccaaccacgaagccgagtgg
cgcgcggtgctggatacgttcttcgacgatttcaccaagcagcttgatacggcggaaaaa
gatccggaagaaggcggcatgcgcccgaaccagatggtgctgaccagtatcgattgcccg
acttgcggtcgtcctatggggatacgtacggcgagcaccggtgtgttcctcgggtgttcg
ggttacgcgctgtcgccgaaagagcgctgcaaaaccaccattaacctggtgccggaaaac
gaagtgctgaacgtgctggaaggtgacgacgcggaaaccaacgcgctgcgcgccaaacgt
cgctgccagaaatgtggtaccgcgatggacagctaccttatcgatccgaagcgcaagctg
catgtgtgtggtaataacccgacctgcgacggctatgaagtcgaagagggcgagttccgc
attaaaggctacgacggtccggtcgttgagtgtgagaagtgtggctctgaaatgcacctg
aaaatggggcgtttcggcaagtacatggcttgcaccaatgaagagtgcaaaaatacccgt
aagatcctgcgtaacggtgaagtagccccgccgaaggaagatccggtgccgctgccggaa
ctgccgtgtgagaagtcggatgcgtacttcgtactgcgcgatggcgccgcgggtgtattc
ctcgccgctaacacgttcccgaaatcgcgcgaaacccgtgcgccgctggttgaagagtta
caacgctttcgcgatcgcctgccggaaaaactgcgttacctggctgatgcgccagcgcag
gatcctgaaggcaacccggccgtggtgcgctttagccgtaaaaccaaacagcagtatgtc
gcctctgagaaagagggcaaagcgaccggctggtctgcgttttacgtcgatggcaagtgg
gcagaagggaaaaagtaa
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