Cronobacter condimenti: AFK62_11280
Help
Entry
AFK62_11280 CDS
T04060
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ccon
Cronobacter condimenti
Brite
KEGG Orthology (KO) [BR:
ccon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccon03016
]
AFK62_11280
Enzymes [BR:
ccon01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
AFK62_11280
Transfer RNA biogenesis [BR:
ccon03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AFK62_11280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
ALB64774
LinkDB
All DBs
Position
complement(2485049..2486158)
Genome browser
AA seq
369 aa
AA seq
DB search
MITTNDALATLCETARTQRALALDTEFVRTRTYYPQLGLIQLYDGENVALIDPLTITDWA
PFQALLQDQNVTKYLHAGSEDLEVFQNAFGMMPDPFIDTQVLASFVGHPLSCGFATLVEH
HTGVVLDKSESRTDWLARPLTERQCDYAAADVWYLLPIAHKLMEQVREAGWLTAAINECR
LMTQRRREVLDPDEAWREINNAWQLRTRQLASLKLLAGWRLRKARERDMAVNFVVREENL
WKVARHMPGSLGELDSLGLSGSEIRFHGKTLVALVAEAQALPEEALPEPLANLIDMPGYR
KVFKEIKALVQETSQAHHISAELMASRRQINQLLNWHWKLKPQNQLPELISGWRGELLGE
SLKTLLQQY
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgataaccaccaatgacgcgcttgcgacgctgtgcgaaaccgcccgtacgcagcgcgcg
ctggcgctggacaccgaatttgtccgtacccgcacctattacccgcagctggggctcatc
cagctttatgacggcgaaaatgtcgcattaattgaccccctgaccattaccgactgggcg
ccgtttcaggcgctgctgcaggatcagaatgtcaccaaatacctccatgcgggtagcgaa
gatctggaagtattccagaacgcgttcggcatgatgcccgatccatttatcgacacgcag
gtattagcctcgtttgtcggccatccactctcctgcggttttgcgacgcttgtggaacac
cacaccggcgtggtgctggataagagcgaatcccgtaccgactggctggcgcgtccgctg
actgagcgccagtgcgactacgcggcggcggacgtctggtatcttctgccgatcgcacac
aagctgatggagcaggtgcgcgaggccggctggctgacggcggcgattaacgagtgccgc
ctgatgacgcaacggcgccgcgaggtgctggaccctgacgaggcctggcgtgaaatcaac
aacgcctggcagttacgcacccgtcagctcgcctccctgaaactactggctggctggcgt
ttgcgtaaagcgcgcgagcgggacatggcggtgaatttcgtggtgcgagaagagaatctc
tggaaagtggcgcgccacatgccgggctcgcttggcgaactcgacagcctggggctgtcc
gggagcgaaattcgtttccatggcaagacgctggttgctctggtggccgaggcgcaggcg
ctgccggaagaggccttgccggagccgcttgccaacttaattgacatgccgggttatcgc
aaagtgtttaaagagatcaaggcgctggtgcaggagacgagtcaggcgcatcacatcagc
gctgaactgatggcgtcgcgtcgccagattaatcaactgctgaactggcactggaaactg
aaaccgcaaaatcagttaccggagttaatcagcggatggcgcggcgagttattaggcgaa
tcattaaaaacactgttgcagcaatattaa
DBGET
integrated database retrieval system
