Cronobacter condimenti: AFK62_15905
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Entry
AFK62_15905 CDS
T04060
Symbol
recC
Name
(GenBank) exonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
ccon
Cronobacter condimenti
Pathway
ccon03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AFK62_15905 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccon03400
]
AFK62_15905 (recC)
Enzymes [BR:
ccon01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AFK62_15905 (recC)
DNA repair and recombination proteins [BR:
ccon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AFK62_15905 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ALB63888
UniProt:
K7ZX72
LinkDB
All DBs
Position
complement(3485177..3488548)
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AA seq
1123 aa
AA seq
DB search
MLRVYHSNRLDVLEAIMEFIVDQQPLPDPFEPEIVLVQSTGMAQWLQMSLAQKFGIAANI
EFPLPASFIWDMFVRVLHDIPQESAFTKQNMRWKLMKLLPGMLSSPEFEMLHHYLHDDED
KRKLFQLASRVADLYDQYLVYRPEWLTRWEAGYLIDGLGEPQRWQAPLWQALVQHTAALG
QPLWHRANLYQRFINTLENAKSRPEGLPARVFICGISALPPVYLQALQALGKHIDVHLLF
TNPCRYYWGDIQDPAFLARLLSRQRKLHAREGTAPLFKDSETAPALFNDEGEQEVGNPLL
ASWGKLGRDYTYLLSGLERFEEMDVFVDIEPDNLLHSLQFDLLELRNQALAGVTLEEFER
SDAKRRLAPDDRSITVHVCHSPQREVEILHDQLLQMLEADPQLTPRDIIVMVADIDSYSP
FIQAVFGSASQERYLPFAISDRRARQAHPALQAFITLLSLPDSRFVSEDVLALLEVPSLS
ARFNIREEGLRFLRQWVNESGVRWGIDDDNVRELALPATGQHTWQFGLTRMLLGYAMESH
LGEWQSVLPYDESSGLIAELVGHLAELLMQLNLWRKGLSQPRPLTEWLPVCRDMLDSFFA
PDTETEAALALIEQQWQAIIEQGIGAHYEEEVPLNLLRDELAKMLDQERISQRFLAGPVN
FCTLMPMRSIPFKVVCLLGMNDGVYPRTLAPLGFDLMSQKPQRGDRSRRDDDRYLFLEAL
LSAQQQLYISYIGRSVQDNSEKYPSVLVQELVDYLAQSHYLPGDEALNCDDSEQNVKAHL
MRLYPRTPFDAENFQPARETQSYAREWLPAASEQGEAHPEFIKPLAPITLEELPFEQFQR
FWRHPVRAFFQLRLKVNFRTEESELPDAEPFTLDSLGRYHMNQQLLNTLVEQQDPEALYR
RYRAAGELPYGAFGELFWESQLQEMQVLAERVLAERNEGESREIALELGQVEMTGWLQHV
QHDGLLRWRPSVLRVEHGMQLWLEHLVYCACGGEGTSRLYGRKDSCWRFPPLPREQAEHY
LRDLIEGYQQGMREPLILLPQSGGEWLKACYDVKNDVILWDDETQHKARNKLIQAWTGNQ
MVEGEGTDIWYQRLWRNLEPDYYEAIIREAQRYLLPLFRHNQP
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgttacgggtttatcactccaaccggcttgatgtgctggaggcgatcatggagttcatt
gttgatcaacagccgcttcctgatcctttcgagcctgaaatcgtcctggtgcagagcacc
ggtatggcgcagtggttgcagatgagcctggcacagaaattcggtatcgccgcaaatatt
gagtttccacttccggcaagttttatctgggacatgttcgtacgcgtactgcatgacatt
ccgcaagagagcgccttcaccaagcagaatatgcgctggaagcttatgaagcttctgccg
gggatgctctcttcgcctgaattcgagatgctgcatcattatcttcatgatgacgaggac
aaacgtaaactgttccagctcgcctcgcgggtggcggatctttacgatcaatatctggtt
taccgcccggaatggttaacccgctgggaggcgggctatctcatcgacggtcttggcgaa
cctcagcgctggcaggcgccgctctggcaggcgctggtccagcacaccgcagctctgggt
cagccgctttggcaccgcgctaatctctaccagcgctttatcaatacgcttgaaaatgcg
aaaagccgtccggaagggttgcctgcacgcgtgtttatttgcggtatttcagcgctgcca
ccggtttacttacaggctttacaggcattgggtaaacatatcgacgtgcatctgctcttt
actaatccatgtcgttattactggggcgatatccaggatcctgcattcctggcgcgtctg
ttaagtcgccagcgcaagctacatgcgcgtgaaggaacagcgcccctgtttaaagacagc
gaaacagcgccagcactttttaatgatgaaggcgagcaagaagtaggaaatccgctactg
gcttcctggggcaagcttgggcgcgattacacttatctgctctcaggccttgagcgcttt
gaagagatggatgtgtttgtcgatattgagcccgataatctgctgcacagcctgcaattt
gatctactggaactgcgtaatcaggcgctggcgggcgtaacgcttgaagagtttgagcga
agcgatgcaaagcggcggcttgctccagacgatcgcagcattaccgtgcacgtttgccac
agtccgcagcgtgaagtggagattctgcacgatcaacttttgcagatgcttgaggcagac
cctcaactcacgccgcgcgatatcatcgtcatggtagcggacatcgacagctatagtccg
tttatccaggccgtatttggcagtgcaagtcaggagcgctatctgccttttgctatttcc
gacagacgcgcccggcaggcacaccctgcgcttcaggcgtttattacactgctctcgctg
cctgacagccgctttgtctcagaagatgttctggcgcttttagaagttccgtcgctttcc
gctcgctttaacatccgcgaagaggggctgcgttttctgcgtcagtgggtgaacgaatca
ggcgtgcgttggggcattgacgatgacaatgtgcgcgaactggctttgcctgcaacggga
caacatacctggcaatttggtttgacgcgtatgctgctgggctacgcgatggaaagtcat
cttggcgaatggcaatctgtcctgccgtatgatgaatccagcggactgattgccgaattg
gtcggccatcttgctgagctcttaatgcagcttaatctatggcgtaaagggctgtcccaa
ccgcggccgctgacagagtggttaccggtttgccgggatatgctggatagctttttcgca
ccggatactgaaaccgaagccgcgctggcgctcattgagcagcaatggcaggccatcatt
gagcagggtattggcgcacactatgaagaagaggtgccgctcaacttattgcgtgatgag
ctggcgaaaatgctcgatcaggagcgtatcagccagcgttttctggccggaccggtaaac
ttctgtacgttgatgccgatgcgttctattccttttaaagtcgtatgtctgcttggcatg
aacgatggggtttatccgcgcacgctggcgccgttagggttcgatctgatgagccagaag
ccgcagcgtggcgaccgcagccgacgcgacgacgaccgctatctttttcttgaggcgcta
ctctcagcccagcagcagctttatatcagttatatcggtcgttccgtacaggacaacagc
gagaaatacccgtcagtgctggtgcaggagctggttgattatctggcgcaaagccactat
ctccccggtgatgaggccctaaactgcgacgacagcgagcaaaacgtaaaagcccatctg
atgcgcctttatccgcgcacaccattcgatgcagaaaacttccagcctgccagagaaacg
caaagttacgctcgtgaatggctgcctgcggccagcgagcaaggcgaagcgcatccggaa
tttatcaagccgcttgcgccgattacacttgaagagttgccattcgaacaatttcagcgt
ttctggcgtcatccggtgcgcgcgtttttccagctacggctgaaggtcaatttccgcacg
gaagaaagcgaactaccagatgccgagccttttacgctcgatagccttggccgctaccac
atgaatcagcaattactgaatacgctggtggaacaacaagacccggaagcgctctatcgg
cgttaccgtgcggcgggagaactgccttatggtgcgttcggcgagctgttttgggaaagt
cagttgcaggagatgcaagtgctcgcagagcgcgtgctggcagaacgcaacgaaggagaa
agccgggagatagcccttgagcttggccaggtagaaatgaccgggtggctacaacatgtt
caacacgacggtctgctgcgctggcggccttcggtactgcgtgttgagcatggaatgcaa
ctttggcttgagcatctggtctactgtgcctgcggcggcgaaggaaccagccggctgtat
ggtcgtaaagacagctgctggcgctttccacctctgcctcgagaacaagcggagcactat
ttgcgggatcttatcgaaggctatcaacagggcatgcgcgaacccctgattttgttaccc
cagagtggcggtgaatggttaaaagcctgctatgacgtgaagaatgacgtcatcttgtgg
gatgacgaaacacaacataaagcgcgaaataaacttatccaggcctggacaggtaatcag
atggttgagggagaagggacagatatctggtatcagcgtctgtggcgcaaccttgagcct
gactattatgaggccattattcgcgaggctcagcgttacttgttaccgttgttccgccat
aaccagccttaa
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integrated database retrieval system
