Cronobacter condimenti: AFK62_16070
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Entry
AFK62_16070 CDS
T04060
Name
(GenBank) oligogalacturonate lyase
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
ccon
Cronobacter condimenti
Pathway
ccon00040
Pentose and glucuronate interconversions
ccon01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccon00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
AFK62_16070
Enzymes [BR:
ccon01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
AFK62_16070
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase22
Tricorn_N
PD40
PolyG_pol
Motif
Other DBs
NCBI-ProteinID:
ALB63920
UniProt:
K7ZXB4
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All DBs
Position
3520664..3521842
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AA seq
392 aa
AA seq
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MAKGMRVKLQYEVSIDPDTGAEITRLTPPEVTCHRNYFYQKCFFNDGSHLLFAGEFDGHW
NYYLLNLAQAEAVQLTEGAGDNTFGGFLSPDDNYLYYVKNDRVLREVNLTTLAERDVYRV
PEDWVGYGTWVANSDCTKLVGIEIAKSDYVPLSDWKIFHDFFHKGPHCRLLRVDLQTGAS
ETIHEEKIWLGHPIYRPFDDNTVAFCHEGPHDLVDARMWMVNEDGSNVRKVKEHADGESC
THEFWVPDGSALIYVSYLKGQQGRTIYRYLPDSGVNEEVMPMPACSHLMSNFDGTLLVGD
GSGTPVDVKDTSGYTIENDPYLYVFDVAQKAYYRVARHDTSWDTFAGSRQVTHPHPSFTP
DGNAILFSTDKDGKPAVYIAKLPEQREMLKVS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaggcatgcgggtgaaacttcagtatgaggtgagcattgacccggataccggg
gcggagatcacccgcttaaccccaccggaagtgacctgtcaccgtaactatttctaccag
aaatgcttttttaacgatggcagccatctgctgttcgctggcgaattcgacgggcactgg
aactactatctgctgaatctcgcgcaggccgaagccgtacagctcaccgaaggtgcgggc
gataatacgtttggcgggtttctttcaccggacgacaattacctctattacgtgaaaaac
gatcgcgtactccgcgaagttaaccttacgacgcttgccgaacgcgatgtttatcgcgtg
ccggaagactgggtcggttacggcacctgggttgctaacagcgactgcaccaaactggtc
ggtattgagattgctaaaagcgactatgtgccgctgagcgactggaaaatcttccacgac
tttttccataaaggcccccactgccgtctgttacgcgtagacttgcaaacgggcgccagt
gaaaccatccatgaagaaaaaatctggctgggacacccgatttatcgtccgttcgacgac
aataccgtcgccttttgccatgaaggcccacacgatctggtcgatgcacgcatgtggatg
gtcaatgaagacggcagcaacgtgcgcaaggtaaaagagcacgccgacggagaaagctgt
acgcatgaattctgggtaccggacggctcggcgttgatttatgtttcctatcttaaaggc
cagcagggccgcaccatttatcgttatctgccagacagcggcgtcaatgaagaagtgatg
ccaatgcctgcatgctcgcacctgatgagtaatttcgacggtacgctgctggtaggcgac
ggttccggcacgccggtggatgtaaaagacaccagcggctataccattgaaaacgaccct
tacctgtatgtgtttgatgtcgctcagaaagcgtattaccgcgtggcgcgtcacgatacc
tcctgggatacgtttgccggtagtcgtcaggtcacgcatccgcatccgtcctttaccccg
gacggcaatgccattcttttcagtactgataaagacggcaaacctgcggtctatatcgcg
aaactgcccgaacagcgtgaaatgctaaaagtgtcataa
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