KEGG   Cronobacter condimenti: AFK62_16585
Entry
AFK62_16585       CDS       T04060                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K03086  RNA polymerase primary sigma factor
Organism
ccon  Cronobacter condimenti
Pathway
ccon02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:ccon00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    AFK62_16585
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccon03021]
    AFK62_16585
Transcription machinery [BR:ccon03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AFK62_16585
SSDB
Motif
Pfam: Sigma70_ner Sigma70_r1_1 Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 DNA_ligase_A_N HTH_SUN2
Other DBs
NCBI-ProteinID: ALB64019
UniProt: A0ABM5VGD7
LinkDB
Position
3630226..3632070
AA seq 614 aa
MEQNPQSQLKLLVTRGKEQGYLTYAEVNDHLPEDIVDSDQIEDIIQMINDMGIQVMEEAP
DADDLLLAENSNNTDEDAEEAAAQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEID
IAKRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAGEARLSDLITGFVDPNAEEDMAPTA
THVGSELSQEEMDDDEDEDEESDDDSSDDDNSIDPELAREKFGELRTQYEVTRDTIKAKG
RSNAASQEEILKLSEVFKQFRLVPKQFDYLVNSMRTMMDRVRTQERIIMKLCVEQCKMPK
KNFITLFTGNETSETWFNAAIAMNKPWSEKLHDVAEDVHRGLQKLQQIEEETGLTIEQVK
DINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKF
EYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPT
PEELAERMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATTES
LRAATHDVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLR
HPSRSEVLRSFLDD
NT seq 1845 nt   +upstreamnt  +downstreamnt
atggagcaaaacccgcagtcacagcttaagcttcttgtcacccgtggtaaggagcagggc
tatctgacctatgccgaggtcaatgaccatctgccggaagatatcgtcgactccgatcag
atcgaagacatcatccaaatgatcaacgatatgggcatccaggtgatggaagaagcaccg
gacgccgacgatctgttgcttgctgaaaactcgaataacaccgacgaagatgcggaagaa
gcggctgcgcaggtgttatccagcgtggaatctgaaatcgggcgcaccaccgatccggtt
cgcatgtacatgcgtgaaatgggtaccgttgagctgctgactcgcgaaggcgagatcgac
atcgctaaacgcatcgaggacgggatcaaccaggttcagtgctccgtcgccgaatacccg
gaagcgatcacctatctgctggagcagtacgatcgcgtggaagcgggcgaagcgcgcctt
tccgatctgatcaccggttttgtcgatccgaatgccgaagaagatatggcccctacggcg
acgcacgtcggctctgaactctctcaggaagagatggatgatgacgaagacgaagacgaa
gagtctgacgacgacagcagcgacgacgacaacagtatcgacccggaactcgcgcgcgag
aagtttggcgaactgcgtacgcagtacgaagtgacccgcgacactatcaaagccaaaggt
cgcagcaacgcggcgtctcaggaagagatcctgaagctttctgaagtgttcaaacagttc
cgtctggtgccgaaacagttcgattacctggtaaacagcatgcgtaccatgatggaccgc
gtgcgcacccaggaacgcatcatcatgaagctgtgcgttgagcagtgcaaaatgccgaag
aagaacttcatcaccctcttcaccggcaacgaaaccagcgaaacctggttcaatgcggcc
atcgctatgaacaaaccgtggtctgaaaagctccacgacgtggcggaagatgtgcaccgc
ggcctgcaaaaactgcagcagattgaagaagaaactggcctgactatcgaacaggtgaaa
gacatcaaccgtcgcatgtctatcggcgaagcgaaagcccgtcgagcgaagaaagagatg
gttgaagcgaacctgcgtctggttatttctatcgccaaaaagtacaccaaccgtggtctg
caattcctggatctgattcaggaaggcaacatcggtctgatgaaagcggtagacaagttc
gaataccgccgcggctacaagttctccacctatgcgacctggtggatccgtcaggctatc
acccgttctatcgcagatcaggcgcgcaccattcgtattccggtgcatatgattgagacc
atcaacaagctcaaccgtatttcacgccagatgctgcaggagatgggccgcgagccgacg
ccagaagagctggctgaacgcatgctgatgccggaagacaaaatccgcaaagtgctgaag
atcgctaaagagcctatctccatggaaacgccgattggcgacgatgaagattcgcatctg
ggtgatttcatcgaggataccacccttgagctgccgctggattctgcgaccaccgagagc
ctgcgtgccgccacgcacgacgtcctggccggccttaccgcgcgtgaagccaaagtactg
cgtatgcgtttcggtatcgacatgaacaccgaccatacgctggaagaagtgggtaaacag
tttgacgtaacccgcgaacgtatccgtcagatcgaagcgaaggcgttgcgtaagctgcgt
cacccgagccgttctgaagtgctgcgcagcttcctggacgattaa

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