Cronobacter condimenti: AFK62_17095
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Entry
AFK62_17095 CDS
T04060
Symbol
treR
Name
(GenBank) trehalose repressor
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
ccon
Cronobacter condimenti
Brite
KEGG Orthology (KO) [BR:
ccon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccon03000
]
AFK62_17095 (treR)
Transcription factors [BR:
ccon03000
]
Prokaryotic type
Helix-turn-helix
LacI family
AFK62_17095 (treR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_3
Peripla_BP_1
HTH_23
HTH_31
HTH_3
HTH_7
HTH_IclR
MarR_2
HTH_Tnp_ISL3
AAA_18
HTH_28
HTH_AraC
HTH_26
HTH_Crp_2
CENP-B_N
TrmB
MarR
HHH
Motif
Other DBs
NCBI-ProteinID:
ALB64112
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All DBs
Position
3722899..3723846
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AA seq
315 aa
AA seq
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MQHRLTIKDIARLSGVGKSTVSRVLNNESGVSERTREKVEAVMRQHGFSPSRSARAMRGQ
SDKVVAIMVTRLDSLSENLAVQTMLPALYEQGYDPIMLESRFSPALVQEHLGVLSRRHID
GVILFGFTGVNEALSAAWQTSLVLMARDVPGFASVCYEDDGAIRLLMQRLYDKGHRHISY
LGVPHSDTTTGKRRHEAYLAFCEEHALTPCDTLPGLAMKQGYDHVADVLRDETTALVCAT
DTLAIGASKYLQQHRGEPVQLASVGNTPLLKFLHPEAIAVDPGYGEAGRAAAKQLIDQIT
RRADPCEIVIPAHLD
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaccgtctcacgattaaagatattgcacgcttaagcggcgtggggaaatccacg
gtctcgcgcgtgctgaataatgagagcggcgtcagtgaacgcacccgtgaaaaggtcgag
gcggtgatgcgccagcacggtttctccccttcccgctcggcgcgcgcgatgcgtggacag
agcgataaagtggtggcgattatggtgacgcgtctggattcgctgtcggaaaatctggcg
gtacagacgatgctgccagcgctttatgagcagggttacgatcctatcatgctggagagc
cgtttttctccggcgctggtgcaggagcatctgggcgtgctgagccgccgccatatcgac
ggcgtgattttgtttggctttaccggcgtcaacgaggcgctgagcgctgcctggcagacg
tcgctggtgttaatggcgcgcgacgtgccaggcttcgcgtcggtctgttacgaggacgac
ggtgcgatacgtctgctgatgcagcgtctttatgacaagggccaccggcacatcagctat
cttggcgtgccgcacagcgataccacaaccggcaagcgccgtcacgaggcgtacctcgcc
ttttgcgaggagcatgcgttgacaccgtgcgatacgctgccaggacttgcaatgaaacag
ggctacgaccatgtcgctgacgtgctgcgtgatgagaccaccgccctggtctgcgccacg
gataccctcgccatcggcgccagtaaatacctccagcaacaccgcggcgagccggttcag
ctggcaagcgtcggcaacacaccgctgctgaaattcctgcatcctgaagcgatcgcggtc
gatccggggtatggcgaagccggtcgcgccgcggcaaaacagcttatcgatcagattacc
cgtcgcgccgatccctgcgaaatcgtgatccctgcccatcttgactga
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