Cronobacter condimenti: AFK62_18005
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Entry
AFK62_18005 CDS
T04060
Name
(GenBank) transcriptional regulator
KO
K14414
transcriptional regulatory protein RtcR
Organism
ccon
Cronobacter condimenti
Brite
KEGG Orthology (KO) [BR:
ccon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccon03000
]
AFK62_18005
Transcription factors [BR:
ccon03000
]
Prokaryotic type
Other transcription factors
Others
AFK62_18005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
Mg_chelatase
AAA_5
AAA
AAA_16
AAA_22
NACHT
AAA_19
AAA_2
MCM
T2SSE
AAA_14
AAA_33
ATPase_2
AAA_7
AAA_25
BrxC_BrxD
IstB_IS21
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ALB64283
LinkDB
All DBs
Position
3922822..3924411
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AA seq
529 aa
AA seq
DB search
MQKRRVVIGILGTVLDRRGKRANRWTKWRPSVALCQQPGLPVDRFELLHQARDASLAERV
AEDIAVVSPHTDVRTHTVVMNDPWDFEEVYAALLDFATRYTFDTDHEEYLVHITTGTHVA
QICWFLLTEARYLPASLVQTSPGRGEEPEEEKAAGTASVIDLDLSRYATLTSRFQREQQQ
SVSFLKSGIDTRNATFNRLIDQIERVALRSTAPILLTGPTGAGKSFLARRIFALRQARHL
VKGRLVAVNCATLRGDNAMSTLFGHVKGAFTGAQQARPGLLREADGGVLFLDEIAELGLD
EQAMLLKAIEEKTFFPFGSDKEVQSDFQLIAGTHRDMATWVAEGRFREDLYARINMWAFA
LPGLAERREDIAPNVEYELQRFCAQQQTLIRFDKSARDAYLAFACSPQARWPGNFRELGS
SVARMATLAEQGRITDALVEEEIVRLQASWQPLTAPAALPVDPATLDLFDQDQLAAVITV
CRRSASLSEAGRALFAVSRQKKANPNDADRLRKYLARFGLSWDQVKAPE
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaacgtcgcgtggtgattggcatattgggtacggtgctggaccggcggggtaaa
cgcgccaaccgctggacgaaatggcggccctctgttgcgctgtgccagcagccgggcttg
cctgtcgatcgctttgaactgctgcatcaggcgcgcgacgcgtcgctcgcagagcgggtg
gcggaagatatcgccgtcgtgtcgccccacaccgacgtgcgcacgcataccgtggtgatg
aacgatccgtgggattttgaagaggtctacgccgcgctgctggatttcgccacgcgctat
acgtttgataccgaccacgaagagtatctggtgcatatcaccaccggcacgcacgtggcg
cagatctgctggttcctgctgaccgaggcgcgctacctgcccgcctcgctcgtccagacc
agtccgggacgtggcgaagagccagaagaagaaaaagccgccggaacggcatcggttatc
gatctcgatttaagccgctacgcgacgctcaccagccgctttcagcgtgagcaacagcag
tcggtctctttcctgaaatctggcatcgacacccgcaacgccacctttaaccggctgatc
gaccagatcgagcgcgtggcgctgcgatcgaccgcccccatcctgctgaccggcccaacc
ggcgcaggcaaatcctttctcgccaggcgtatttttgcgctgcgccaggcgcggcatctg
gttaaggggcggctggtcgcggtgaactgcgcgacgcttcgcggcgataacgcaatgtcg
acgctgttcggccatgtgaagggcgcatttaccggcgcgcaacaggcgcggcccggtctt
ttgcgcgaggcggacggcggcgtgctgtttcttgatgagatagccgaactgggccttgat
gaacaggcgatgctgttaaaagcgattgaagagaaaacctttttcccgtttggctcagat
aaagaagtgcagagcgattttcagcttatcgccggtacgcaccgcgatatggcgacgtgg
gtcgctgaagggcgttttcgcgaagatctctatgcgcgcattaacatgtgggccttcgcg
ctgccgggcctcgccgagcgccgcgaagatatcgcgccaaacgtggaatatgaactgcaa
cggttctgcgcgcagcagcaaacgctgatccgctttgataaatctgcccgtgacgcctat
ctcgctttcgcctgttcgccgcaggcgcgctggccgggaaacttccgcgaactcgggagt
tcggtggcgcgtatggcgacgcttgccgaacaaggacgcattaccgacgcgctggtcgaa
gaagaaattgtgcgactgcaagcgagctggcagccactgaccgcccccgccgcgctgccg
gttgacccggcgacgcttgacctcttcgaccaggatcagctggcggcggtgataaccgtg
tgcagacgcagcgcctcgctctcggaagccggacgcgcgctattcgccgtctctcgccag
aaaaaagccaaccccaacgacgctgaccggctgcgcaagtatctggcacgctttgggctg
agctgggaccaggtgaaagcgccagagtga
DBGET
integrated database retrieval system
