Cronobacter condimenti: AFK62_19880
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Entry
AFK62_19880 CDS
T04060
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ccon
Cronobacter condimenti
Pathway
ccon03030
DNA replication
ccon03410
Base excision repair
ccon03420
Nucleotide excision repair
ccon03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AFK62_19880
03410 Base excision repair
AFK62_19880
03420 Nucleotide excision repair
AFK62_19880
03440 Homologous recombination
AFK62_19880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccon03032
]
AFK62_19880
03400 DNA repair and recombination proteins [BR:
ccon03400
]
AFK62_19880
Enzymes [BR:
ccon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AFK62_19880
DNA replication proteins [BR:
ccon03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AFK62_19880
DNA repair and recombination proteins [BR:
ccon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AFK62_19880
NER (nucleotide excision repair)
GGR (global genome repair) factors
AFK62_19880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
HHH_5
HHH_2
Prok-E2_E
Motif
Other DBs
NCBI-ProteinID:
ALB64638
LinkDB
All DBs
Position
complement(4319341..4322124)
Genome browser
AA seq
927 aa
AA seq
DB search
MVQIPENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLILQYQPTHAAV
VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT
LAKEAAAAGRAVLISTGDKDMAQLVTPDVTLINTMTNTVLGPEEVCAKYGVPPELIIDFL
ALMGDASDNIPGVPGVGEKTAQALLQGLGGLDALYANPEKIAELSFRGAKTMAAKLEQSK
EVAYLSYQLATIKTDVELELSHDRLEVQQPLADELLALFRQYEFKRWTSDLEAGKWLQSR
GKPAAKPTETIVVEAQPEEEAVVLSAERYVTILDEETLQAWIARIKSAPVVAVDTETDSL
DNLTANLVGISFATEPGLAAYIPVAHDYLDAPDQLSRDRVLELLKPLLEDETLVKVGQNL
KFDRGILQNYGIELRGIVFDTMLESYILDSVSGRHDMDSLSSRWLKHTTITFEQIAGKGK
NQLTFNQIDLEQAGRYAAEDADVTLQLHLKMWPKLQQHKGPLNIFEHIEMPLVPVLSRIE
RNGVKIDPAVLHTHSQEIALKLAELEQKAHEIAGEPFNLSSTKQLQTILFEKQGIKPLKK
TPGGAPSTSEEVLEELALDYPLPKVILQYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQ
AVTATGRLSSTDPNLQNIPVRNDEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDK
GLLSAFAEGKDIHRATAAEVFGLPLESVSTEQRRSAKAINFGLIYGMSAFGLSRQLNIPR
KESQKYMDLYFERYPGVLEYMERTRKQAKEQGYVETLDGRRLYLPDINASNAARRAGAER
AAINAPMQGTAADIIKRAMIAVDAWLEKEQPRVKMIMQVHDELVFEVHKDDVEAVSQKIH
ELMENSMQLDVPLLVEVGSGPNWDQAH
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggttcagatcccagaaaatccccttatcctcgtcgatggctcttcttacctgtatcgc
gcatatcacgcgtttccgccgctgacgaacagcgccggcgagccgacaggcgcgatgtat
ggcgtgctgaatatgttgcgcagcctgatattacagtatcagccgacccacgccgccgtg
gtgtttgacgcgaaagggaaaaccttccgtgatgaactgtttgagcattacaaatcccac
cgcccgccaatgcctgacgatctgcgtgcgcagatcgagccactacacgcgatggtaaaa
gcgatggggctgcccttgctggcggtttctggtgtagaggcagacgatgttatcggcacg
ctggcgaaagaagcggcggcggcagggcgcgcggtgcttatcagcactggcgataaagac
atggcgcagctcgttacgccagatgtcacgcttatcaatacgatgaccaacacggtgctt
gggccggaggaagtctgcgcgaaatatggcgtgccgccagagctgattatcgacttcctg
gcgctgatgggtgacgcttccgataacatcccgggtgttcccggtgtgggcgaaaaaacc
gcgcaggcgctgttgcagggccttggcgggctggatgcgctctatgcgaacccagagaaa
attgcagagctctccttccgtggtgccaaaaccatggcagcgaagcttgagcagagcaaa
gaggtcgcttatctctcctaccaactggcaacgattaaaaccgacgttgagctggagctg
agccacgatcgtcttgaagtccagcagccactggcggacgaactgctggcgctcttcagg
cagtatgagttcaaacgctggacgtccgatctggaagccggcaaatggctacagtcacgc
ggcaaaccggccgctaaaccaacagaaaccattgtcgttgaggcgcagccggaagaagaa
gccgtcgtgctctcggcagagcgttacgtcactatccttgatgaagagacgttgcaggcg
tggatcgcgcgcatcaaaagcgctcccgtggtggcggtggacactgaaactgacagcctc
gacaacctgacggccaacctcgtcgggatctcttttgccaccgagccgggtctggctgcg
tatattcccgtcgcgcacgactatctggacgcaccggatcagctttcccgcgatcgcgtg
ctggaactgctcaaaccgctgctggaagacgaaacgctggtgaaagtagggcaaaacctg
aagttcgaccgcggcattttacagaattacggcattgagctgcgcggcatcgttttcgat
accatgctggagtcttacattctggacagcgtctctggccgccacgatatggatagcctc
tccagccgctggctgaaacacactaccatcacgtttgagcagatcgctggtaagggcaaa
aaccagctcacgtttaaccaaatcgatcttgagcaagccgggcggtatgccgcggaagat
gcagacgtgacgcttcagttgcatctcaaaatgtggccaaagctgcaacagcacaaaggc
ccgctgaatatctttgagcatatcgaaatgcccctggtgccggtgctgtcgcgcattgag
cgcaacggcgtgaaaatcgatccggcagtgctgcatactcattcgcaggagattgcgctg
aagcttgccgagcttgagcagaaggcgcatgagattgcgggcgaaccgtttaatctctcg
tctacgaaacagctgcaaacgatcctgtttgaaaagcagggcattaagccgctgaagaaa
acgccgggtggcgcgccgtctacgtcagaagaggtgctggaggagctggcgcttgactat
ccgctgccgaaagtcattctgcaataccgcggactcgcgaagctgaaatcgacgtatacc
gacaaactgccgctgatgatcaacccgaaaacgggccgtgtgcatacctcttatcatcag
gcggtaacggcgacagggcgtctgtcctcaaccgatccgaacctgcaaaacattccggta
cgtaacgatgaagggcgtcgtattcgccaggcgtttatcgcgccggaagattacgtgatt
gtttcggccgactactcgcagattgaactgcgcatcatggcgcatctgtcacgcgataaa
gggctgctcagcgcctttgccgaagggaaagacattcaccgcgcaacagccgcggaagtc
tttggtctgccgctggagagcgtatcaactgaacagcgtcgcagcgctaaggcgataaac
ttcgggctgatttacggcatgagcgccttcggcctgtcacgtcagctcaatatcccgcgt
aaagagtcgcaaaagtacatggatctttacttcgagcgctatcctggcgtgctggaatat
atggagcgcactcgcaagcaggcaaaagagcagggctatgtggaaacgctggatgggcgt
cgcctttacctgccggatatcaacgccagcaatgcggcgcgtcgcgcaggtgctgaacga
gcagcgatcaacgccccgatgcagggtactgcggcggatatcatcaaacgtgccatgatt
gcggtcgacgcctggcttgagaaagagcagccgcgcgtgaaaatgatcatgcaggtacac
gatgaactggtgtttgaggtgcataaagatgacgttgaagcggtgtcgcagaaaatccat
gaattgatggaaaacagcatgcagctggatgtcccgctgctggtggaagtcggtagcggc
ccgaactgggatcaggcccactaa
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