Campylobacter coli OR12: ATE51_00452
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Entry
ATE51_00452 CDS
T04527
Name
(GenBank) exonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ccoo
Campylobacter coli OR12
Pathway
ccoo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ATE51_00452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccoo03400
]
ATE51_00452
Enzymes [BR:
ccoo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ATE51_00452
DNA repair and recombination proteins [BR:
ccoo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ATE51_00452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
Viral_helicase1
AAA_19
UvrD_C_2
SLFN-g3_helicase
AAA_5
AAA_11
AAA_24
AAA
ATP_bind_1
AAA_14
AAA_16
NB-ARC
AAA_22
PIF1
NACHT
AAA_7
ABC_tran
bpMoxR
NPHP3_N
RsgA_GTPase
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ALU98767
LinkDB
All DBs
Position
226459..229182
Genome browser
AA seq
907 aa
AA seq
DB search
MENNILIQILDIDRNINKNIVRNKEDRGFLSQNILNELRNLLEHIALCIYNTDTNQQLDS
IYENLQSSLKYIGDKRKYKDIKNFHNLLQISVSHYTPNEEVAERLMLKYLFYLFQTRNFC
KEFLDIQILNNLQEFPINLDTLSFQYYERVVDKIKQTSMFNDTKTDKFYIQKVKPFIINE
EIYYEITFTIAKDNVSKFDKLIAFSKYYIPSNYSTKLTLYYTNIKLLNLQIPVILILQWN
IDIRPCEFTNFCLIFNSIRMSFTRSTKYEHFMQFLTKEELNLLDIVKLKTEEYDEIKNQF
SEDKLKHLFNCLDMAREIILNNKSGSNILSYILYAMNNQIIKKQIPKKKNSYQPNPKLSN
LFLKNESIPFDEMPFCSNPAGHIPKLNVLFECISLNNREYELLARKIQYNSEVNGSLYTS
LEDFKEDNIEVLIEKYNTALYNGHKKNRSIKKLHDKFLFINEYQDTLIEIIQLLNNFTKS
GLDHYKENINEWLKECNQLDCKEKKDYLSNLFCNSKLALIYGAAGTGKTTLIEHISSFFH
DKNKLYLANTNTAVNNLRQRLDIQNSSFSTVASYIANKNNISKKFDIVFIDECSTISNKD
IFSVLDDIKLKCEILICVGDIYQIESIRFGNWFLFAQKFFSDIQLELKHIYRTKSEKLQL
LWERVRTLDESMLEAIEKNNSSENIQNFNFSRSVNDEIILCLNYGGIYGVNNINKFLQEN
NPHKSFYFNGLSYKVDDPILFNENSSRFGEEFHNNLKGTITNIEEDEKTINFTIKINKII
QSINNNFTIITKNDKDTEIKFSVTRLNSDEEDDNSNIVPFQVAYAISIHKAQGLEYDKVS
IIVADEIEEQITHNIFYTAITRAKKELKIYWSAETENKILKSLKIKDINKDFHLFKNNIQ
NIKTLKN
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaataatatactgatacagattttggatattgatcgcaatattaataaaaatatt
gttaggaataaagaagacagaggttttttatctcaaaatattttaaatgagctaagaaat
ttattagaacatatagccttatgtatttataatactgatacaaatcagcaattagatagt
atttatgaaaacttgcaatcaagtttaaaatacattggagataaaagaaaatataaagat
ataaaaaattttcataatttacttcaaatttcggtatctcattatacacctaatgaagaa
gttgctgaaagattaatgttgaaatatttattctatttatttcaaacaaggaatttttgt
aaagaatttttagatattcaaatattaaataatttacaagaatttccaataaatcttgat
acgttgagttttcaatattatgagcgtgttgttgataaaattaaacaaacaagtatgttt
aacgataccaaaacagataagttttatattcaaaaagtcaaaccatttataattaatgag
gagatatattacgaaataacttttactatcgcaaaagataatgtaagtaaatttgataaa
ttaattgctttttcaaaatattacattcctagcaattattctacaaaattaactttgtat
tatacaaatataaaactactaaatttgcaaatacctgttattttaattcttcagtggaac
atagatattcgtccttgtgagtttactaatttttgtttaatatttaattcaataagaatg
tcttttacgagaagcacaaaatacgaacattttatgcaatttctaacaaaagaagagctt
aatttgcttgatattgtaaaattaaaaactgaagaatatgatgaaataaaaaatcaattt
agtgaagataaattaaagcatctatttaattgtttggatatggctagagagataatctta
aacaataaatccgggtcaaatattcttagttatatattatatgcaatgaataatcaaatt
atcaaaaaacaaattcctaaaaagaaaaatagctatcaacctaatccgaaactatcaaat
ttatttttaaaaaatgaaagcattccatttgatgaaatgccgttttgttcgaatccggca
ggacatattccaaaattaaatgttttatttgaatgtattagtttaaataatagggaatac
gaattattggctaggaagattcagtataattcagaggtaaatggttctttgtataccagc
ttggaagattttaaagaagataatattgaagtattgatagaaaaatataatacagcatta
tataatggacataagaaaaatagatcaataaaaaaacttcatgataaatttttatttata
aatgaatatcaagatacactaatagagataattcaattattaaataattttacaaaaagt
ggtcttgatcattataaagaaaatataaacgaatggttgaaagaatgtaatcaattagat
tgcaaagaaaaaaaggattatttaagcaatctattttgcaattcaaaactagcattgata
tatggagcagctggaactggaaaaacaacattaatagaacatatatctagtttttttcat
gataagaataaattatatttagccaatacaaatacggctgttaacaatttaagacaaaga
cttgatattcaaaattcatctttttctactgttgcttcatatatagcaaataaaaataat
atttcgaaaaaatttgatattgtatttattgatgagtgtagcactattagcaataaagat
atttttagtgttttagatgatataaagttaaagtgtgaaattttaatttgtgtaggcgat
atatatcaaattgaatctatcaggtttggaaattggtttttatttgctcaaaaatttttt
tcagatattcaattggagttaaagcatatttatagaacaaaaagtgagaaattgcaatta
ttatgggaaagagttagaacacttgatgaaagcatgcttgaggctattgaaaaaaataat
agttctgaaaatattcaaaattttaatttttcacgaagtgtaaatgatgaaattatttta
tgtttgaattatggtggtatatatggagtaaataatataaataaattcttacaagaaaat
aatcctcataaatcattttattttaatggattatcctataaggtcgatgatccaattttg
tttaacgaaaattcatcaaggtttggcgaagaatttcataataatcttaaaggaactata
actaatattgaagaggatgaaaaaactataaattttactattaagattaacaagataata
caaagtataaataacaattttacaataataactaaaaatgataaagatactgaaattaaa
tttagtgttacaagattaaattcagatgaagaagatgataatagtaatatcgttcctttt
caagtagcatacgctatttctatacataaagcacaaggtttagaatatgataaagtttct
attattgtagctgatgaaattgaagaacaaattacacataatattttttatacagcaatt
accagagctaaaaaagaattgaaaatatattggtctgcagaaactgaaaataaaatattg
aaatctttaaaaatcaaagatataaataaagattttcatttatttaaaaataatattcaa
aatataaaaacattaaaaaattag
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