Campylobacter coli OR12: ATE51_01074
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Entry
ATE51_01074 CDS
T04527
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ccoo
Campylobacter coli OR12
Pathway
ccoo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccoo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ATE51_01074 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccoo03019
]
ATE51_01074 (pnp)
03016 Transfer RNA biogenesis [BR:
ccoo03016
]
ATE51_01074 (pnp)
Enzymes [BR:
ccoo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ATE51_01074 (pnp)
Messenger RNA biogenesis [BR:
ccoo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ATE51_01074 (pnp)
Transfer RNA biogenesis [BR:
ccoo03016
]
Prokaryotic type
tRNA degradation factors
ATE51_01074 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
S1_RRP5
DUF2501
S1_2
Mrpl_C
Motif
Other DBs
NCBI-ProteinID:
ALU99072
LinkDB
All DBs
Position
complement(532668..534884)
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AA seq
738 aa
AA seq
DB search
MLNIFKSLTNLLYGKKGQMMQYSIEINGNLEVFDIEKVAKQAAGAVLMRQGKSVVLAAVA
REEKPVEEDFLPLTVQYIEKAYAAGKIPGGYVKRETKPSDAETLTARIIDRSLRPLFPKG
YAYPTQIVVMVLSADPQVDLQVMSLNAASVALYLSDIPMKAPVCGVRIGRIEEKFVLNPN
NEELKNSTLDLYVAGVKDELLMIEMRALPNQKEDEIFIEAPYADVLTQTTSQSMNELSED
EILEALSLAQKAILNGSNAYEEAFLKHKKSSDLNFKDEIENFELLAFIENNFHDQIVQAI
NQMAKSERASELNKIAEKILNFESATKWDEESILNALAKVKHKIVRSQILNTKKRADGRN
LNEVRPIAIETNILPNAHGSCLFTRGQTQALVVATLGSENDAQMVDVLTEKNPINERFMV
NYNFPGFSVGEASPIKAPGRRELGHGNLAKRALYPSIDENYPYVIRLVSEILESNGSSSM
ATVCGGSLALRAAGVPSLKLVAGVAMGLIFEGDQYAILTDIMGLEDHDGDMDFKVAGSKD
GITALQMDIKLGGIDQKILKEALYQAKEGRIHILNIMEEALKEIVVNEEVLPKLELFNVD
PSKIVDIIGQAGKTIKEIIEKFGVSIDLDREKGEVKIAGNENEQIKAAKDYIINITSSQK
NNKKGFKEKDLSNFEIGEEFEGKVKKITNFGAFIELKNGIDGLLHNSKSKNLNLSENQIL
KVKVSEIKNGKISVDLCE
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
ttgctaaatatttttaaaagtttgacaaatttattatatggaaaaaaaggacaaatgatg
caatacagtatagaaatcaatggtaatttagaagtattcgatatagaaaaagtagctaaa
caagctgcaggtgctgtgcttatgcgacaaggaaaaagtgtcgttttagccgcggttgca
agagaggaaaagcctgttgaagaagactttttgcctctaactgttcagtatatagaaaaa
gcctatgcagcaggaaaaatcccgggcggctatgttaaaagagaaaccaaaccaagcgat
gcagaaactttaactgcacgcattatagacagaagtttgcgtccactttttccaaaagga
tatgcctacccgacacaaattgtcgtaatggttctttctgctgatcctcaagtagatctt
caagttatgagtctaaatgcagcaagcgtagcactttatcttagtgatattcctatgaaa
gctcctgtttgtggagttcgcataggtcgcatagaagaaaaatttgtcctaaatccaaac
aatgaagaacttaaaaatagcacccttgatctttatgtagcaggggttaaagatgagctt
ttaatgatagaaatgcgtgctttacctaatcaaaaagaagatgaaatctttatcgaagct
ccttatgcagatgttttaacccaaacaacttcacaaagcatgaatgaacttagcgaagat
gaaattttagaagcgctaagtctagcccaaaaagctatattaaatggctctaatgcttat
gaagaagcttttttgaaacataaaaaatcaagcgatttaaatttcaaagatgaaatagaa
aatttcgaacttctcgcctttatagaaaataattttcacgatcaaatcgtacaggctatc
aatcaaatggcaaaaagtgaaagagcgagtgagttaaataaaattgctgaaaaaatatta
aattttgaaagcgcgacaaaatgggatgaagaaagtattttaaatgccctagcaaaagtc
aaacataaaatcgttcgtagccaaattttaaatacaaaaaaaagagcagatggtagaaat
ttaaatgaagtgcgtcctattgccatagaaacaaatattttacctaatgcacatggctct
tgcctttttacacgcggacaaactcaagctttggttgtggcgactttaggtagtgaaaat
gatgcgcaaatggttgatgtgttaaccgaaaaaaatcctatcaatgaacgctttatggtt
aattataattttccaggtttttcagtaggcgaggcaagccctatcaaagcacctggaaga
agagagttaggacatggaaacttagccaaaagagccctttatccaagcatagatgaaaat
tatccttatgttatccgtttggtaagtgaaattttagaaagcaatggctctagttctatg
gcaacggtttgtggagggtctttagccttaagagcagcgggagtacctagcttaaaactt
gtagcaggagtagctatggggcttatttttgaaggcgatcaatatgctattttaactgat
atcatgggcttagaagatcatgatggggatatggattttaaagtagcaggtagcaaagac
ggtatcacagccttacaaatggatatcaaattgggcggtattgatcaaaaaatactcaaa
gaagccttgtatcaagctaaagaaggtagaattcatatcttaaatatcatggaagaagca
cttaaggaaattgttgttaatgaagaggtattgccaaaactcgagcttttcaatgttgat
ccctcaaaaatagtcgatatcataggtcaagctggaaaaactatcaaagaaattattgaa
aaatttggtgtttctatagacttagatcgtgaaaagggtgaagtaaaaattgcgggcaat
gaaaacgaacaaattaaagccgcaaaagattatattatcaatatcacaagttctcaaaaa
aataataaaaaaggctttaaagaaaaagatctatcaaactttgaaatcggcgaagaattt
gaaggaaaagtcaaaaaaatcacgaattttggagcctttatagaacttaaaaatggaatt
gatggcttgcttcataattctaaaagtaaaaatctcaatttaagtgaaaatcaaatttta
aaagtaaaagtaagtgagattaaaaatggcaaaatctctgtggatttatgcgagtga
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