Crateriforma conspicua: Mal65_05350
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Entry
Mal65_05350 CDS
T09863
Symbol
recQ_1
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ccop
Crateriforma conspicua
Pathway
ccop03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mal65_05350 (recQ_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccop03019
]
Mal65_05350 (recQ_1)
03400 DNA repair and recombination proteins [BR:
ccop03400
]
Mal65_05350 (recQ_1)
Enzymes [BR:
ccop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mal65_05350 (recQ_1)
Messenger RNA biogenesis [BR:
ccop03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Mal65_05350 (recQ_1)
DNA repair and recombination proteins [BR:
ccop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Mal65_05350 (recQ_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
Cas3-like_C_2
ResIII
Motif
Other DBs
NCBI-ProteinID:
QDV61412
LinkDB
All DBs
Position
671706..673700
Genome browser
AA seq
664 aa
AA seq
DB search
MASSARSTKRSTKSASGSVDPPASPRPIGGDPREVLRDTFGLPHFRDGQYAVIDRLLAGK
NVAAVFPTGGGKSLCYQLPSQMLPGVTVVVSPLIALMKDQCDSLAARGVAAARSDSGLTP
AEFRAASQGVRDGSIKILFVSPERFFNERFLASIDGLPISLFAIDEAHCISQWGHNFRPD
YLKLAGLTRRLAAERVLALTATATPEVLADIRDAFDIAPDDCIQTPFHRPNLRLRSSLHS
AEQQYNALAERIRSRPRGSTLVYVTLQKTAEEVAERLTDDGIPATAYHAGLDKDERQSIQ
QTFVQEDDAIVVATIAFGMGIDKSNLRYVYHYNPPKSMESYAQEIGRAGRDGKPATCEML
LVPEDRVVLENFVYGDTPSRHAVGRFIDLVAGQADTFHVSHYRLSSESDIRVLVIRTLLT
YLELEGHLQATSPRFDSYKIKPLVTSQAILKHFDGERRQFVAGILSSLTKGRTWFTLNMV
LATQRLGGDRQRIVKALDHMAEQGWMELQATELVHGYRWIKRFDDRKTVADDLFDRLARR
EEGEVRRIDEVYHLAAADNCMAARLAKHFGQSLEDGCGQCSHCTGDAAGPVPATKPRPLG
SSVARLLGDVTKQYPDQFTHTRDKARFLCGLSSPALIRSRLTRHAGYGVCQHLPFAHVLQ
QLDG
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttctgcacgttcaaccaaacgttcgacgaaaagtgcgtccggatccgtcgat
cctccggcgtcaccacgaccgatcggtggcgatcctcgcgaagtcttgcgtgacaccttt
ggtttgccgcactttcgcgacggccaatacgcggtcatcgatcgtttgttggcaggcaaa
aatgtggccgctgtctttccgacgggcggcggaaaaagtctgtgctatcaattgcccagc
caaatgttgcccggcgtcaccgtggtggtgtcgccattgatcgcgttgatgaaagaccaa
tgcgattcgctggccgcgcgtggtgtcgcggcggcacgcagcgattcgggtttgacgccg
gcagaattccgcgccgccagccagggtgtccgtgacggatcgatcaaaattttgttcgtt
tcgcccgaacgctttttcaatgaacggttcttggcgtcgatcgacgggttaccgatttcg
ttgttcgcgatcgacgaggcgcattgcatcagccaatggggccacaattttcggcctgac
tatttgaaactggccgggttgacccgacgcttggcagccgagcgtgtgttggcgttgacc
gccaccgcgacgccggaagtcttggccgacattcgcgacgcgttcgacatcgcgccggat
gattgcattcaaaccccatttcatcggcccaacttgcggctccgcagttcgctgcattcg
gccgaacagcaatacaacgcactggccgaacgaattcgcagccgtccccgcggcagcacg
ctggtctatgtgacgctgcagaaaacagcggaggaagtcgccgaacgtttgaccgacgac
ggcatccccgcgacggcctaccacgcgggactggataaggatgaacgccaatcgatccag
cagacgtttgtccaagaggatgatgccatcgtggtcgcaacgatcgcctttgggatgggc
atcgacaaatccaacctgcggtacgtgtatcactacaacccgccgaagtcgatggagtcg
tacgcccaggaaatcggtcgtgccgggcgcgacggcaaaccggcgacttgcgaaatgctg
ttggtccccgaagatcgcgtggtgctggaaaactttgtctatggtgacaccccgtcacgg
catgccgtgggccggttcatcgatctggtcgccggccaagcggacacgtttcacgtatcg
cattaccggttgtccagcgaatcagacattcgtgtgttggtgattcgaacgttgctgacg
tacttggaactggagggccatttgcaggcgacgtcaccgcggtttgattcctacaagatc
aagccgctggtcacatcgcaggcaatcttgaaacatttcgatggtgaacgacgacaattc
gtggccgggattttgtcgtcgctgaccaaaggacgcacttggttcacgctgaacatggtg
ttggcgacccagcgtctgggcggcgatcgccagcggatcgtcaaagcgctggaccacatg
gccgaacagggatggatggaattacaggcgacggaactggtgcacggttatcgttggatc
aaacgattcgatgatcgaaagacggtggccgatgatttgtttgatcgtttggcccgccgt
gaagaaggcgaagtgcgtcgtatcgacgaggtgtatcacttggccgcggccgacaactgt
atggcggcaaggttggctaagcatttcggccagtcactggaagacggctgtggtcagtgc
agtcactgcaccggtgatgcggccggccccgtccccgccaccaaaccgcgtcccctggga
tcatcggttgcccgtttgctgggcgatgtcaccaaacagtatcccgatcagttcacccac
acgcgggacaaggcacgctttttgtgcggtttgtcatcacccgcgttgatccggtctcgg
ttgacccgccacgcgggctatggcgtgtgtcaacatttgccgttcgctcatgttttgcag
cagttggacggatag
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