Crateriforma conspicua: Mal65_06520
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Entry
Mal65_06520 CDS
T09863
Symbol
rnc
Name
(GenBank) Ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ccop
Crateriforma conspicua
Brite
KEGG Orthology (KO) [BR:
ccop00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Mal65_06520 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccop03019
]
Mal65_06520 (rnc)
03009 Ribosome biogenesis [BR:
ccop03009
]
Mal65_06520 (rnc)
03036 Chromosome and associated proteins [BR:
ccop03036
]
Mal65_06520 (rnc)
Enzymes [BR:
ccop01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
Mal65_06520 (rnc)
Messenger RNA biogenesis [BR:
ccop03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Mal65_06520 (rnc)
Ribosome biogenesis [BR:
ccop03009
]
Eukaryotic type
90S particles
RNase
Mal65_06520 (rnc)
Prokaryotic type
rRNA processing factors
Mal65_06520 (rnc)
Chromosome and associated proteins [BR:
ccop03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
Mal65_06520 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DND1_DSRM
Rota_NS26
Motif
Other DBs
NCBI-ProteinID:
QDV61527
LinkDB
All DBs
Position
complement(846418..847392)
Genome browser
AA seq
324 aa
AA seq
DB search
MILAGGPAGRYAAITVAHRWLGRSLGSPIHRRVTKSTLREMLSRRLFLSLSNEIHVNSPD
QLLGPESTSVHLIDDADAGDQDAKIRRCQDIIDYQFSDETLLRAALTHASGASNRLASNE
RLEFLGDAVLGLMVCEWLFEEYPEYNEGDLTKIKSAVVSRRSCGRVACRLGLDRCLIVGR
GVTRNRSYPRSLVSDVFESVIAAIYLDGGRDAIRDRIREWLQDEVDAAVESQGASNYKSS
LQQHAQRDLANTPVYQLVRETGPDHRKAFLISAVIGEQSFTPAWGNNKKDAEQRAAANAL
AELREEPLPYPSGAAGESSSETSV
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgattctggccggggggccggccggtcgatatgctgcaataacggtcgctcaccggtgg
ctggggcgatcgctcggttcccccatccaccggcgtgtgacaaagtcaacgctgcgggaa
atgctctcgcggcggcttttcctgtctttgtcgaatgaaatacacgtgaactctccggac
cagttgctgggtcctgaatccacgtccgtacatctgattgatgacgcggatgcgggtgac
caggacgcaaaaatccgtcgctgccaagacatcatcgattatcagttctccgacgaaacg
ctgctgcgtgcggcgctgactcatgcgtcgggagcgtccaaccgcttggccagcaatgaa
cgcttggaatttttgggggatgccgtgctgggcctgatggtctgcgaatggctcttcgaa
gaataccccgagtacaacgaaggcgatttgacgaagatcaaatcggccgttgtcagccgg
cgttcctgtggccgtgtggcctgtcgcttgggcctggatcgatgcctgattgtcggtcgc
ggcgtgacacgaaaccgcagctacccccggtcgttggtcagcgacgtttttgaatcggtc
attgccgcgatctatctggacggcgggcgggatgcgatccgcgatcgcattcgcgaatgg
ctacaggacgaagtcgacgcggcggtcgaaagccaaggggccagtaactacaaatcgtcg
ctgcagcagcacgcccaacgtgatctggccaacactccggtgtatcagctggttcgcgaa
actggcccagaccatcgcaaggcgtttttgatctctgcggtcatcggtgaacaatccttc
acgcctgcgtggggtaacaacaagaaagacgccgaacaacgcgccgcggcgaacgctttg
gccgaattgcgtgaagaaccactgccgtatcccagcggtgcagccggcgaatcgtcttcc
gaaacctcggtttga
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