Crateriforma conspicua: Mal65_10040
Help
Entry
Mal65_10040 CDS
T09863
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ccop
Crateriforma conspicua
Pathway
ccop03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mal65_10040 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccop03019
]
Mal65_10040 (deaD)
03009 Ribosome biogenesis [BR:
ccop03009
]
Mal65_10040 (deaD)
Enzymes [BR:
ccop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Mal65_10040 (deaD)
Messenger RNA biogenesis [BR:
ccop03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Mal65_10040 (deaD)
Ribosome biogenesis [BR:
ccop03009
]
Prokaryotic type
rRNA helicases
Mal65_10040 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
QDV61877
LinkDB
All DBs
Position
complement(1314382..1316646)
Genome browser
AA seq
754 aa
AA seq
DB search
MTFVSEISPTSDADTSEVQPAPAADKLENEATTVGESAVVEGAPVDGDASDQAVSPTGEQ
HSGDQNPANQTSGDQAIGNPTSGDRDQQDQVVNSGEAAMSDATTTTDAESKSQPSETAEA
ATPASQEDPSVAPEPDQPSFANLGLTEEVLRAVEASGYQSPTEIQARVIPELASGRDVLA
QSQTGTGKTAAFALPILSHVDLHGDTPQALVLTPTRELAIQVARAFSTYAGKTKKFRVAA
IYGGQDYEPQLKQLRRGAHVVVGTPGRVIDHVKRGSLNLSSVRCLVLDEADEMLNMGFLE
DVEFVLQHSPEDQQIALFSATVPPAIRDISKHYLSDPVHITVRRKQVTAEQIDQKAIIVP
PRLKQEVLRRYLEVEPTDGVIVFTKTKDATIALAERLGHGGFRAMALNGDMPQKVRERTV
AQLKDGQIDILVATDVAARGLDVKRISHVVNFDLPHDNEAYVHRIGRTGRAGRDGHAILL
VTPAQRGKLRSIEKTTRQKIEIAQPPSAEQLNQKRIEEFKASVKETVESKDLEFFTGLIE
SLASDSDLTPQTIAAALAFQSQRGRSFLAKDLPTAPEKNRQPSRERHDRDDSFGDDSSRR
SGPPRRLGPVRKGMSRYRIEVGRRDRVKPGNIVGAIANEGGIDGQFIGPMLIHDTFTILD
LPESMPHDVMETLQRTWVAGKQLGLKVDTGGPNRVGGSDRSGEDSSGRPRFKRGKFQRGR
DDDRGPAGKRGPHSKRGAGKRGPAGKGGYSKKRR
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgacattcgtttccgaaatttctcccacgtccgacgccgacacctcggaagttcaaccc
gccccagcagcggacaagcttgagaacgaagccacgaccgtcggtgaatccgccgtggtg
gagggtgcccctgttgatggcgatgcgtctgatcaggctgtcagccccaccggggaacag
cattccggcgaccagaatcccgccaatcagacttccggcgaccaggccatcggcaacccg
acttccggtgaccgagatcagcaggatcaggtcgtgaactcgggcgaagcggccatgagc
gatgcgacaacaacaactgatgccgaatccaaatcgcagccaagcgaaacggccgaagcg
gccacgccggcgtcgcaagaggatccatcggttgcaccggagccggatcaaccgtccttc
gccaatctgggattgaccgaagaagttttgcgtgcggtcgaagcctcgggttaccaaagc
ccaacggaaatccaagcaagggtcattccggaactggccagcggtcgcgacgtgttggct
caatcgcaaaccgggaccggcaagacagccgccttcgcattgcccatcctcagccacgtc
gacttgcacggtgacacgccgcaagcgttggtgctgacgccgacccgcgaattggccatc
caagtggctcgcgcgttttcgacgtacgcgggcaagaccaagaagtttcgcgtggcggcg
atctatggcggccaagattacgaaccacagttgaaacaactgcgtcggggtgctcacgtc
gtggtgggcacgccgggtcgggtgatcgatcacgtcaagcgtggttcgctgaacttgtcg
tcggtccgttgtctggtgctggatgaagcggacgaaatgctgaacatgggcttcttggag
gacgtggaattcgttctgcagcattccccggaagaccaacaaatcgctttgttctccgcg
acggttccgccggcgattcgcgatatcagcaagcactatctatcggatccggtccacatc
accgttcgccgtaaacaggtaacggccgagcagatcgaccagaaagccatcatcgttccg
cctcgtttgaaacaggaagtcttgcgacgatacctggaagtcgaaccgaccgacggcgtg
atcgtgttcaccaagaccaaggacgcgacgattgccttggccgaacgtcttggccacggc
ggctttcgtgcgatggcactgaacggagacatgccacaaaaagttcgcgaacgcacggtc
gcacaactcaaggacggccagatcgacatcctggtggcaaccgacgtcgccgcacgcggc
ttggacgtcaaacgcatcagccacgtggtcaatttcgatctgccccatgacaacgaagcc
tacgtgcaccggatcgggcggaccggacgtgcgggccgtgacggccacgcgatcttgctt
gtcacaccggcacagcgtggcaaactgcggagcatcgaaaaaaccacacgccagaaaatc
gagatcgctcagcccccgtccgccgaacaactgaatcagaagcggatcgaagaattcaag
gcttcggtgaaggaaacggtggaatccaaagacctggaattcttcaccggtttgatcgaa
tcactggcgagtgattcggacctgacgccacagaccattgccgccgcactggcattccag
tcacagcgtggacgatcgttcttggcgaaagacttgccgaccgcccccgagaagaatcgc
cagccatcgcgggaacgacatgaccgtgacgactcgttcggcgatgattcgtcacgacgt
tcggggccaccgcgtcgtctgggtcccgtgcgaaagggcatgtcgcggtaccgaatcgaa
gtcgggcgacgcgatcgcgtaaagccgggaaacatcgtcggtgcgatcgccaacgaaggc
ggcattgatggccaattcattggcccgatgttgattcacgatacgttcaccatcctggac
ctgcccgagtcgatgccgcatgacgtgatggaaacgcttcaaagaacctgggtggctggc
aagcaattgggtctgaaagtcgacaccggcggtcccaaccgcgttggcggcagcgatcga
tcaggcgaagattcgtccggacgcccgcgcttcaaacgtggaaagttccaacgggggcgc
gatgacgaccgcggccccgccggaaaacgaggcccccattccaagcgtggcgccggcaaa
cgcgggccagccggcaagggcggttattccaagaagcgtcgctag
DBGET
integrated database retrieval system
