Crateriforma conspicua: Mal65_19070
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Entry
Mal65_19070 CDS
T09863
Symbol
polC
Name
(GenBank) DNA polymerase III PolC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ccop
Crateriforma conspicua
Pathway
ccop03030
DNA replication
ccop03430
Mismatch repair
ccop03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Mal65_19070 (polC)
03430 Mismatch repair
Mal65_19070 (polC)
03440 Homologous recombination
Mal65_19070 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccop03032
]
Mal65_19070 (polC)
03400 DNA repair and recombination proteins [BR:
ccop03400
]
Mal65_19070 (polC)
Enzymes [BR:
ccop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Mal65_19070 (polC)
DNA replication proteins [BR:
ccop03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Mal65_19070 (polC)
DNA repair and recombination proteins [BR:
ccop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Mal65_19070 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
BRCT
RNase_H_2
DNA_pol_A_exo1
CV_2116-like
Motif
Other DBs
NCBI-ProteinID:
QDV62771
LinkDB
All DBs
Position
complement(2358793..2359827)
Genome browser
AA seq
344 aa
AA seq
DB search
MDFTAIDFETASHRKDSACQLAAVRVSEGKIIDSANWLIRPVPAYFNPSNIRIHGITPDQ
VADERTFGQLWPDIQPWLEDQILVAHNAAFDIGVLRACLQQHRCEIPELSFTCTRAIAKR
TWPDRRRYGLKPLATWLGVDFRHHDALEDSIACAKILLAAGISRKAESVADLESRLGLAR
GGAGPWGYRGATTQRRRRSRQASQANDTALSTPTPPHSEPEDTPGVDFQRLLIRAQFIQP
LAGQRIVFTGRLRVLQREQAERLACESGGQCQGNVNGKTSLLVRGCPDERTAAAGRTESV
KEQTARQRRAAGQNIRVLDEKEFLGLILGTDTVGQWVGEESDQS
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggatttcaccgctatcgatttcgaaaccgccagtcaccgcaaagacagcgcatgccaa
ttggcggcggtgcgtgtcagcgaaggcaagatcatcgattcggccaactggttgatccgc
ccggtcccagcctatttcaacccgtcgaacatccgcattcacgggatcacccccgatcaa
gtcgccgacgaacggaccttcggtcagctttggcccgacattcaaccgtggctggaagat
cagatcctggtggctcacaacgcggcgttcgacatcggcgtgttgcgtgcttgcctgcaa
caacatcgctgcgagattccagagctcagcttcacctgcacccgcgcgatcgccaaacgc
acttggcctgatcgccgacgttatggtctgaaacccttggccacttggctgggtgtggat
tttcgtcatcacgacgctttggaagattccattgcctgtgccaagatcctgttggccgcg
gggatcagccgcaaagccgaatcggtggcggatctggaatcgcgactgggacttgcccgc
ggcggagccggcccctggggatatcgcggtgccaccacccagcgccgtcgccgcagccgc
caagcatcccaagcaaacgacaccgctttatccacacccacgccaccccacagtgaaccg
gaagacacacccggcgtcgatttccagcgtctgctgatccgcgcccagttcattcagcct
ttggcaggacagcgaatcgtcttcacgggtcggctgcgggtcctgcagcgtgaacaggcg
gaaagattggcctgtgaatcgggcggccagtgccaaggcaacgtgaacggaaaaaccagt
ttgctggtccgcggatgccccgacgaacgaaccgcggcggcgggccgaacggaaagcgtc
aaggaacaaaccgcccgacaacgccgcgccgccggccaaaacattcgggtcttggacgaa
aaagaattcttggggctgatcctgggcaccgacaccgtgggccagtgggtcggcgaggaa
tcggatcaatcgtag
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