Crateriforma conspicua: Mal65_28510
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Entry
Mal65_28510 CDS
T09863
Symbol
rny
Name
(GenBank) Ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
ccop
Crateriforma conspicua
Pathway
ccop03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mal65_28510 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccop03019
]
Mal65_28510 (rny)
Messenger RNA biogenesis [BR:
ccop03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Mal65_28510 (rny)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
LapA_dom
dUTPase
DUF3020
Motif
Other DBs
NCBI-ProteinID:
QDV63705
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Position
3646620..3648188
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AA seq
522 aa
AA seq
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MTAETAQFILYCLFFFFLGVAAVLAVAQRMYARFQQRLETQAKEIKEAAKREAEVERNRI
IVDAKEQALQLRRDAEQELAVERNQQHKLISKLERREELLVTQEESLIKQQRGLEHSQTV
LTKKTRDLDQQRELLQQRIDEQTKVLEKASGLSRTEATDQLLDSLRDELQSEVGATLLKH
QKILEQRVEQQSREMLLTAIQRFASAHTAESTTSTVDVPTDDMKGRIIGREGRNIRAFEK
KTGVDLIIDDTPGVVIVSAFDPVRREIARASLEKLITDGRIHPSKIEETVDATEKEIDSF
IERKGIEAADEINVSGLHQRVIKMLGRLHFRTSYSQNVLRHSVEVAFISGLLAEMIGLDG
DLGRRAGLLHDIGKAADHELEGGHPKIGGDLLARSGECDVVVHAARGHHDEIVTEYPYTM
LVATADACSASRPGARRESLERYVKRMEELEAIAKRFDGVHQAFAISAGRELRVLVNSEN
TDDQHAAVICREIAKAFEQELTYPGEIKVTVVRESHFIEVAK
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgactgccgagacagctcaattcatcctttactgcctgttctttttcttcttgggcgtg
gccgctgtgctggcggtggcccagcggatgtacgctcgattccaacaacgcttggaaacg
caggccaaagagatcaaggaagccgccaagcgggaagcggaagtcgaacgaaaccggatc
atcgtcgacgccaaagaacaagcgttgcagttgcgccgcgatgccgaacaggaactggct
gttgaacgaaaccagcaacacaagctgatcagcaagctggaacgccgcgaagaattgttg
gtaactcaggaagaaagtctgatcaaacagcaacgcgggctggaacacagccaaacggtg
ctgaccaaaaaaacgcgtgatctggatcaacaacgcgaactgttgcaacaacgcatcgac
gaacagaccaaggtgctggaaaaggccagcgggctttcgcggaccgaggcgacggatcaa
ttattggattcgttgcgtgatgaactgcaaagcgaagtcggtgcaacgcttttgaaacat
caaaagattttggaacagcgagtcgaacaacagagtcgcgagatgttgttgacggcaatc
cagcgttttgcatcagcgcacaccgccgaatccacgaccagcaccgtcgacgtcccgacc
gatgacatgaaaggacggatcatcggtcgcgaaggtcgaaacatccgcgcgttcgagaag
aagaccggtgtggatttgatcatcgacgacacgcccggtgtggtcatcgtcagcgcgttt
gatccggtgcgtcgcgagatcgcgcgggcatcactggaaaagctgatcaccgacggacgc
attcacccgtcgaaaatcgaagaaacggtcgatgcgacggagaaggaaattgattccttc
attgaacgcaaaggcatcgaagcggcggacgaaatcaacgtcagtgggctgcatcaacgc
gtgatcaagatgctgggccgattgcattttcggacaagctacagccaaaacgttttgcgg
cacagcgttgaagtcgcctttatcagcgggctgcttgccgaaatgatcggactggacggc
gacctcggacgccgcgccggactgctgcacgacatcggcaaggcggcggaccacgaactg
gaaggcggccaccccaaaatcggtggcgatttgttggcaaggtcgggtgaatgcgatgtc
gtcgtccatgcggctcgtggtcaccacgatgaaatcgtgaccgaatatccgtacacgatg
ctggtggcgaccgccgatgcctgcagcgccagtcgccccggggctcgccgtgaatcgctg
gaacggtacgtcaaacggatggaagaactggaagcgatcgccaagcggtttgacggcgtt
catcaggctttcgccatcagtgccggtcgagagcttcgtgtcttggtcaacagcgaaaac
accgatgatcaacacgccgccgtgatctgtcgcgaaatcgcgaaagcttttgaacaggaa
ctgacgtacccgggtgaaatcaaggtcaccgtggtgcgtgaatcccacttcatcgaagtc
gccaagtaa
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