Crateriforma conspicua: Mal65_29490
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Entry
Mal65_29490 CDS
T09863
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ccop
Crateriforma conspicua
Brite
KEGG Orthology (KO) [BR:
ccop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccop03016
]
Mal65_29490 (truB)
Enzymes [BR:
ccop01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Mal65_29490 (truB)
Transfer RNA biogenesis [BR:
ccop03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Mal65_29490 (truB)
Prokaryotic type
Mal65_29490 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QDV63802
LinkDB
All DBs
Position
3806934..3807926
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AA seq
330 aa
AA seq
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MKFFGFLNCHKPPGMTSRDLVNLGTGAIRKSYRERLAVVVSDTDGSPEQSDAPTPRLKPP
KVGHAGTLDPLAEGVLVMGVGPAAKLTSYLQLASKQYQAHFVLGQRSESGDLEQPVQIID
DAPVPTLGELQSAARQLTGRIRQVPPSHSAIKINGRRAYKMARKGVDVPMPARAVDIHEL
TIQRYEYPNVWLDICCGSGTYIRTLGMDLARQCGTESVMHHLVRTRVGQFELADAMSVQQ
IREGRCMSLIRPANEGLSHLTTIHLDDEQTWRITNGLSLHVSRTRTTAAGDKEIRDAAAI
DPSGDVCAIAQRRSDHWRPTRVFHKRLFTL
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaagttctttggtttcctgaactgccacaaacccccgggaatgacctcgcgtgacttg
gtcaacctgggaacgggagcaatacgcaaatcgtatcgcgagcgtttggccgttgtcgtt
tccgacactgacggttcgcccgaacagtctgacgccccgacgccccgcctgaaacctccc
aaggtcggacacgccggcacgcttgatccgttggccgaaggggtgctggtcatgggcgtc
ggcccggccgccaagctgaccagttatttgcaactggcgtccaaacagtatcaagcccat
ttcgtcctggggcagcggagcgaatcgggcgatttggagcaaccagtccagatcatcgac
gacgctcccgttccgacgctgggcgaacttcaatctgctgcccgccaattgaccggccgc
atccggcaagttccgcccagccattcggcgatcaaaatcaacggacgccgtgcctacaaa
atggctcgcaaaggcgtcgacgtgccgatgcccgcccgcgccgtcgacattcacgaattg
accatccagcgatacgagtaccccaacgtttggctggacatttgctgtggcagcggcaca
tacattcggacgttgggcatggacctggcacggcagtgcggtaccgaatcggtgatgcac
catttggtacggactcgcgtgggtcagttcgaattggccgacgcgatgtccgtccaacag
attcgtgaaggccggtgcatgtcactgattcggcccgccaacgaaggcttgtcccatctg
accacaattcacctggatgacgaacagacctggcgaatcaccaatggtctgtcacttcac
gtttcgcgaactcgaacgaccgccgcgggcgacaaagagattcgcgatgcggccgcgatc
gatccttcgggcgacgtttgcgcgattgcacagcgacgcagcgatcattggcggcccacg
cgggtgtttcacaagcggcttttcacgctctag
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