Crateriforma conspicua: Mal65_32410
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Entry
Mal65_32410 CDS
T09863
Name
(GenBank) hypothetical protein
KO
K03628
transcription termination factor Rho
Organism
ccop
Crateriforma conspicua
Pathway
ccop03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mal65_32410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccop03021
]
Mal65_32410
03019 Messenger RNA biogenesis [BR:
ccop03019
]
Mal65_32410
Transcription machinery [BR:
ccop03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Mal65_32410
Messenger RNA biogenesis [BR:
ccop03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Mal65_32410
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
Spore_III_AA
S1CSD-TOTE-2
AAA
AAA_14
OB_RNB
Motif
Other DBs
NCBI-ProteinID:
QDV64091
LinkDB
All DBs
Position
complement(4247382..4248902)
Genome browser
AA seq
506 aa
AA seq
DB search
MSSNRNSPLGGRHGSGNHHHGGSDRARDGRNHRNDRARHPDKQIDRRVRELDAEKDPLSL
PEEIVSEATKTGKRVGIPDANEPHPRTNIAELQRLDMDVLVGMASDDGLNDIDGLSKQDL
IFRILKERMKAGGLMFGEGTLEILPDGFGFLRSAEYHYVSCPDDIYVSPSQIRRFGLQTG
SHVAGQIRPPKENERYFALLRIEAINRHDPMRRNQHTSFDDLTPLHPNSRIIMETAAEDL
STRVVDMLTPIGFGQRGLIVSPPRAGKTVLMQQMARSVLANYPSAYVFVLLIDERPEEVT
DMEREVRGSQCEVISSTFDEPPQRHIQVAQMVIEKAKRMVETGVDVVIFLDSITRLARAH
NSEGETTGKLLTGGLDAGALQKPKAFFGSARKVEEGGSLTILATALVDTGSRLDDVIFEE
FKGTGNLEIVLDRALVDRRVWPAIDIARSGTRREEMLLDENEYRRISALRSHLADLSPAD
AMKQLISQLRKTQNNAEFLMGLKNVD
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgaatcggaattccccgctgggtggccgtcatggatctggcaatcaccaccat
ggcggatcagatcgtgcgcgcgacggccgcaatcatcgaaacgaccgcgcccgacatccc
gacaaacaaatcgatcgtcgcgtccgcgaattggatgcggaaaaagacccgttatcgttg
ccggaagaaatcgtcagcgaagccaccaagacgggcaaacgtgtcggcattcccgatgcc
aacgaaccgcacccacggaccaacatcgccgaactccagcgattggacatggacgtgctg
gtcggcatggcgtcggacgacggtctgaacgacatcgacggtttgtccaagcaagatttg
atctttcgcatcctgaaggaacgaatgaaggccggcgggctgatgttcggcgaaggcaca
ttggaaatcttgcccgacggattcggctttttgcgcagcgccgaataccactacgtttct
tgtcccgacgacatctacgtttcgcccagccagatccgtcgcttcggattgcagaccggc
agtcacgttgccggccaaattcgtccgccgaaggaaaacgagcgatactttgcgttgctt
cgcatcgaagcgatcaatcgtcacgatccgatgcgtcgcaaccagcacacgtcgttcgat
gatttgacgccgttgcatccgaattctcggatcatcatggaaaccgccgcggaagacctc
agcactcgcgtggtcgatatgctgacgccgatcggctttgggcaacgggggttgatcgtc
agcccgccacgggccggcaagaccgtgttgatgcaacagatggctcgatcggtgctggcc
aattatccatcggcttatgtgttcgtcttgttgattgacgaacgccccgaagaagtcacc
gacatggaacgtgaggtccgtggcagccagtgtgaagtcatcagcagcacgttcgacgaa
ccgccacaacgtcacatccaagtggcgcaaatggtgatcgaaaaagccaaacggatggtg
gaaaccggtgtcgacgtggtgatctttttggattccatcacacgactggcccgggcacac
aacagcgaaggcgaaacgaccggcaagctgttgaccggtggattggatgccggcgcgttg
caaaagccgaaagcgttttttggttcggcacgcaaagtcgaagaagggggttcgctgacc
attctggccaccgccctggtggacaccggcagtcgtttggacgatgtgatctttgaagaa
ttcaaaggcaccgggaacctggaaatcgttttggatcgcgcgctggtcgaccgtcgcgtt
tggccggccatcgacatcgcccgcagcgggacgcgacgcgaagaaatgttgctggacgaa
aacgagtaccgacggatttccgccctgcgatcacacttggccgatttatcgcccgccgat
gcgatgaaacagttgatcagccaattgcggaaaacccaaaacaacgccgaatttttgatg
ggactgaagaatgtcgactga
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