Crateriforma conspicua: Mal65_40210
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Entry
Mal65_40210 CDS
T09863
Name
(GenBank) 2',5' RNA ligase family
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
ccop
Crateriforma conspicua
Brite
KEGG Orthology (KO) [BR:
ccop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccop03016
]
Mal65_40210
Enzymes [BR:
ccop01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Mal65_40210
Transfer RNA biogenesis [BR:
ccop03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Mal65_40210
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
QDV64853
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All DBs
Position
complement(5261092..5261667)
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AA seq
191 aa
AA seq
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MQLIRSFIAVPLEKPVERSAVKLLRSLQQEQDGIRWVPAENLHLTLKFLGDVDNRQVPVV
CEAIRSVVSQVDAFPLLFRGTMALPSDLKARVLCAGVDDPTQTLVQMVASLEKAMAELGF
KPEARDYVPHLTLGRVRKTSRRANDDVLRRLRAQQDVHLGTMTADRALLMASFLDRGGPT
YQVMATIPFGQ
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgatccgatcctttattgctgttccattggaaaaaccggtcgaacgatcggcc
gtcaaactgctgagatcgttgcagcaagaacaggatggtattcgttgggtgccagcggaa
aacttgcatctgactttgaaatttttgggcgacgtggacaatcgtcaggtgccggtcgtt
tgcgaagcgatccgttcggtggtgtcacaagtggacgcgtttccgctgttgtttcgtgga
accatggccctgccctcggatttgaaggctcgcgttttatgtgcgggggtggatgacccg
acgcaaacattggttcagatggtcgcttcgcttgaaaaggccatggcggaattagggttc
aaaccggaggcacgtgactatgtgcctcacctgaccttggggcgtgttcgcaagacgtcg
cgtcgcgccaacgatgacgttctgcgccgcctgcgggcacagcaggacgttcatctagga
accatgaccgccgatcgcgccctgttgatggccagctttctggatcgcggtggccccacg
taccaagtcatggcgacgattccgtttgggcaataa
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