Crateriforma conspicua: Mal65_46640
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Entry
Mal65_46640 CDS
T09863
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
ccop
Crateriforma conspicua
Brite
KEGG Orthology (KO) [BR:
ccop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccop03019
]
Mal65_46640 (yhaM)
Messenger RNA biogenesis [BR:
ccop03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Mal65_46640 (yhaM)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
HD
TraI_2
Cas3_HD
SseC
Motif
Other DBs
NCBI-ProteinID:
QDV65493
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All DBs
Position
6086850..6087983
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AA seq
377 aa
AA seq
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MDRTDAKANGSSDQGFQTLDHHAQVCQIAVATESPQSNRIFGARHAPLRQWNRLTVTSTA
PRIAINQLADGQTVAQAFRVADKQIRVNRQGGKYLFLRLADRTGKIVGMMWNVDERVADS
FDRADYIHTEGRTQVHNGALQVIVTQLERMDPSEVDPADFEQFDAEQSQRLMARLTEQLG
SIEDPQLSRLAQCYLNDGDLMNQLASAAAAVVHHHAFPGGLLRHTVDLMELADFVGKRYE
SIDRDLLLLGAFLHDLGKMHELSSDGELSYTDRGQMVGHIVIGIQMLGDKIQQIDTPETP
FPVDLRYQLEHLIVSHHGEFEYGSPRLPSTMEAVALHHIDNLDAKISSFASVIEQDVSAD
PHWTNYNPSIGRKLWKK
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggaccggactgacgccaaggctaacggatcatccgaccaaggctttcaaaccctggac
catcatgcccaggtgtgtcagattgccgttgcgaccgaaagcccgcagtccaaccgaatc
ttcggtgcgcgtcatgccccccttcgacaatggaatcgccttaccgtgacatcgaccgcc
ccccgcatcgcgatcaatcaattggccgacggccagacggtggcccaggcatttcgtgtt
gccgacaaacagattcgagtcaaccgccagggcggcaagtacttgttcctacgtctggcc
gatcgaacgggcaagatcgtgggcatgatgtggaacgtcgacgagagagtggccgattcg
ttcgaccgggccgactacatccacaccgaagggcgaacgcaagttcacaacggtgcgttg
caagtcatcgtcacacagctggaacgcatggacccatcggaggttgacccggcggacttc
gagcaattcgacgccgagcagtctcagcgtttgatggctcggctgaccgagcagttgggt
tcgatcgaagacccccaactgtcacgattggcccagtgctatctgaacgacggtgatctg
atgaaccaattggcctccgccgctgcggcggtcgtacatcatcacgctttccccggtggg
ttgctgcgtcacaccgtcgacctgatggaactggccgacttcgttggcaagcgatacgaa
tcgatcgatcgcgatctgttgttgctgggggctttccttcacgacttgggaaagatgcac
gaactgtccagcgacggcgagttgtcgtataccgatcgcggccaaatggtcggccacatc
gtgatcgggatccaaatgctgggcgacaagatccaacaaatcgatacaccggagacacct
ttcccggtggacttgcggtaccaattggaacacctgatcgtcagccatcacggcgaattc
gaatacggcagcccacgattgccgtcgacgatggaagcggtggcgttgcatcacattgac
aacttggacgccaagatcagcagctttgccagcgtgatcgaacaagacgtttcggccgac
ccacactggaccaactacaacccgtcgatcggacgaaaattgtggaagaagtga
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