Crateriforma conspicua: Mal65_47470
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Entry
Mal65_47470 CDS
T09863
Name
(GenBank) Bacterial extracellular solute-binding protein, family 5 Middle
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ccop
Crateriforma conspicua
Pathway
ccop02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ccop00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Mal65_47470
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccop02000
]
Mal65_47470
Transporters [BR:
ccop02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Mal65_47470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Spore_YpjB
Motif
Other DBs
NCBI-ProteinID:
QDV65575
LinkDB
All DBs
Position
complement(6205112..6207487)
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AA seq
791 aa
AA seq
DB search
MADRHAGRIFRRSIALSAVGLRCILVCCLFAVTVSTSVARAAELLNYAQSGSPPDPGLQL
LQEEPHDLIFFSKDAGGGWVKARLLDLPNRTSINGQTGTLRVEVLGIDDRVFGAKWSDVD
RIDFWEQRLKRETSERIARRDFKGAYPFLSVLIRDFPNLPELTQIRSDFLWQDAIDRASR
SEFVQSLAMLKELRRYNPDYKVDRLLGAIDGLNDRLMGKLVEDGKLDDAQKMLSQLEDEY
RGQNLKSVAKWNQAFVRMATQRMDQAIAAKDREDYRDAHRLARDAVHLRPSLAGAKELVR
ELNRIYPMVNVGVLQAARDLDPTNMSNWASRRSGRLLYRTLFEMRGAGPEGGEYEFLFGQ
TEQSADRLEFDLYFEPESLPPPLNQVNGFDVFDRIADRARPESETYFTAFAAALKTMGMN
GPKEIRCILRRPHVLPASLLQLPVDGSWFGQEIGAPTGDYERVGVDEVESRYRLINQPRI
ESQPREIIETKMSSAAEGVAQLLQGEIDVLDQLFPSDAARLKSSRDIRVSEYPLPTVHML
IPCSDHPFVAERTFRRALLYGINREDILKGELLEGFQTPGCQVISGPFPAGKERDDPMGY
AYDRTIQPRRYEPSVAKLLVALNQNEMKSAAQRAEKEMPEMTPLRLAYPSDNLSRTACEA
IKSQWQLLDLDVELVELPTGASYPEEDTADLVYTSLAIWEPIIDARRLLGPNGLAQSGNQ
YIGLGLRQLEESRNWREARDRLLLLHFYVSQELPILPLWQLIDSYAYRRQVRGIGTDIVS
LYENADQWQLQ
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccgtcacgcgggacgcattttccggcgatcgatcgcgttatcggcggtgggg
ctccggtgcatcctggtgtgttgtctttttgcggtaacggtttccaccagcgttgcccgc
gcggctgagttgctgaactacgcccagtcaggatcgccacccgacccgggactgcagttg
ttgcaggaagaaccccatgacctgatctttttcagcaaagatgccggtggcggttgggtg
aaagctcgtttgttggatttgcccaaccgaacatccatcaacggccaaacgggaacgctg
cgggtggaagtgttgggaatcgacgaccgtgttttcggggccaagtggtcggacgtcgat
cggattgatttctgggaacagcgtctgaaacgcgaaacgtccgagcggattgcccgccgc
gatttcaaaggcgcttatccgtttctttccgtgctgattcgtgatttcccaaatctgccc
gaattgactcagattcgcagcgattttctctggcaagacgcaatcgatcgtgcgtcccgc
agcgaatttgtgcaatcgttggcgatgctgaaagaactgcgacgttacaacccggattac
aaagtcgatcgattgttgggggcgatcgacgggctgaacgatcgactgatgggtaagttg
gtcgaagacggcaagttggacgacgcccagaaaatgttgtcgcaactggaagacgagtac
cggggccagaacctaaaaagcgtcgccaaatggaaccaagccttcgtgcggatggccacg
cagcgaatggatcaagcgattgccgccaaggaccgtgaagactatcgcgacgcgcatcgc
ttggcccgagacgccgttcatctgcggccatccctggcgggcgcaaaagaactggttcgt
gaactgaatcgcatctatccaatggtcaatgtcggcgtgttgcaagccgcacgtgacttg
gacccgaccaacatgtccaactgggcgtcgcgtcgatcggggcgattgttgtaccgaaca
ttatttgaaatgcgtggcgccgggcctgagggtggtgagtacgagtttctgtttgggcaa
accgaacagagtgccgaccggttggagtttgatctttacttcgaacccgaaagtttgcct
ccgccattgaaccaggtgaatggttttgatgtgtttgatcgcattgccgatcgggcacgt
ccagaaagtgaaacctatttcacggctttcgccgcggcgctgaaaacgatgggcatgaac
ggccccaaggaaatccgctgtatcctgcggcgtcctcacgtgttgccagccagtctgttg
caattgccggtggacggatcgtggttcggtcaggagatcggggcgccgacgggggactat
gaacgagtcggtgtcgatgaagtggaatcgcgttaccgtttgatcaaccagccgcggatt
gaatcgcagccccgggagatcattgaaacgaaaatgtcatcggccgccgaaggcgtcgcg
cagttgttgcagggcgaaatcgatgtattggatcaactgttcccttcggatgccgctcgc
ttgaaaagcagtcgtgacattcgtgtgtcggaatatccattgccgacggtgcacatgctg
attccctgcagcgatcatccctttgtcgctgaacgtacattccggcgtgctttgttgtac
gggatcaatcgcgaagacattttaaaaggcgaactcctggaaggcttccaaacgccagga
tgtcaggtcatttccggcccgttcccggccggcaaggagcgggatgatccgatgggctat
gcctatgatcggacgatccagccgcggcggtatgagccctcggttgccaagttgttggtc
gcactgaaccagaatgaaatgaaatcggccgcgcagcgtgcggaaaaagagatgccggag
atgacgccgctgcgtttggcgtatccgtcggacaacctgtcgcgaaccgcttgcgaagcg
atcaagtcgcagtggcaactgttggatttggatgtcgaactggtcgaactgcccaccggt
gcgagttatcccgaggaagacaccgccgacttggtctacacgtcactggcaatttgggaa
cccatcatcgatgcgcgacgactgttggggcccaacggtttggcccaaagcggcaatcag
tacatcggtctcggtctgcggcaattggaagaatcgcgaaactggcgtgaggctcgcgat
cgcttgctactgctgcacttctacgtcagccaggaattgccgatcttgccgttgtggcaa
ttgatcgattcctatgcgtatcgccgtcaggtccgtgggatcgggacggacattgtttca
ctttacgaaaacgccgaccaatggcagctgcaatga
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