Crateriforma conspicua: Mal65_48340
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Entry
Mal65_48340 CDS
T09863
Symbol
ffh
Name
(GenBank) Signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
ccop
Crateriforma conspicua
Pathway
ccop02024
Quorum sensing
ccop03060
Protein export
ccop03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ccop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
Mal65_48340 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Mal65_48340 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Mal65_48340 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ccop02044
]
Mal65_48340 (ffh)
Enzymes [BR:
ccop01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
Mal65_48340 (ffh)
Secretion system [BR:
ccop02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
Mal65_48340 (ffh)
Eukaryotic Sec-SRP protein
Mal65_48340 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
AAA_18
AAA_31
AAA_16
AAA_33
AAA_30
APS_kinase
ATP_bind_1
Nucleocap_ssRNA
AAA_17
KTI12
nSTAND3
Zeta_toxin
Thymidylate_kin
Motif
Other DBs
NCBI-ProteinID:
QDV65661
LinkDB
All DBs
Position
complement(6328305..6329789)
Genome browser
AA seq
494 aa
AA seq
DB search
MFESLSDGLQGAFKSLSGKGKLTESNMREGLELVKQSLLDADVSYSVIEEFMSHVSERAL
GKRVLLSLRPHEELVRIVHDELVSLLGPVDTSLHLKKDGPTIIMLCGLQGSGKTTTCGKL
AQLLLEENIKPLLVAADLQRPAAIEQLHVIGRQLNVPVYSDSENKNPVQVCKAGVDKANA
EDARVVILDTAGRLAIDDELMAELQRIDKRVSPDQVYLVVDGMTGQDAVQSAGAFNEALE
LDGVVMTKLDGDARGGALLSVKHVTGVPIKFMGTGEHFDALEPFRPDGMASRILQMGDIV
AAAREAHRIVDEKEREEMEAKMASGDFTLDDFKNMMEKVAKPGLMGKMMSLMPGMNQFKE
VMESEEAAGGIKQTIGAINSMTQDERKNPKLIDAARRTRIAKGAGVQTPVVSQLVKQFEM
MKPVMQMMAGKGAGDRMKMMQQLQASGAMTDPRGMGAVKVSKGTGKRLSPAEKAKQRKER
DKLMRRMKRKKGKR
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgaatccctttcggacggattgcaaggtgcgtttaagtcgctgtcgggcaaaggc
aagctgactgaaagcaacatgcgggagggattggagctggtcaaacagtccctgttggac
gccgacgtcagctattcggtcatcgaagaattcatgtcgcacgtgtccgagagggcgctg
ggcaaacgggtgctgttgtcgttgcggccgcacgaggaattggtgcggatcgttcacgac
gaattggtgtcgctgttggggccggtggacacgtcgctgcacctgaaaaaagatggcccg
accatcatcatgctgtgcgggttgcagggaagcggaaagacgacgacttgtggcaagctg
gctcagttgttgttggaagaaaacatcaagcccttgctggtcgccgctgacctccagcgg
cccgccgcgatcgaacaactgcacgtcatcggccgccagttgaatgtgccggtctacagc
gacagcgaaaacaagaatcctgttcaggtctgcaaggcgggggtggacaaagccaacgcg
gaagacgcccgcgtggtgatcttggacaccgccggtcgattggccatcgacgatgaattg
atggccgaattgcaacggatcgacaaacgcgtcagtcccgatcaggtctatctggtcgtc
gacggcatgaccggtcaagacgcggtgcaaagtgccggcgccttcaacgaggcgttggaa
ctggacggcgtggtgatgaccaagttggacggggacgcccgcggcggtgcgttgctgtcg
gtcaagcacgtcaccggggtgccgatcaaattcatggggaccggcgagcactttgatgcg
ctcgagccctttcggcccgacgggatggccagccgcattctgcagatgggcgacatcgtg
gcggccgcccgggaagctcaccgaatcgtcgacgaaaaagaacgtgaggaaatggaggcc
aagatggcttccggtgatttcacgttggacgatttcaagaacatgatggaaaaggtggcc
aaaccgggactgatgggcaaaatgatgtcgctgatgccggggatgaatcagttcaaagaa
gtcatggaaagcgaagaagcggccggcggtatcaagcaaaccatcggcgccatcaacagc
atgacccaggatgaacgcaagaatcccaagctgatcgacgccgcccgccggacacggatc
gccaagggagccggcgtgcaaacccccgtcgtgtcacagttggtcaagcagtttgagatg
atgaaaccggtcatgcaaatgatggcgggcaaaggtgccggcgaccggatgaaaatgatg
cagcaactgcaggccagcggtgcgatgaccgatccgcgtgggatgggggcggtcaaggtc
agcaaggggaccggaaaacgtctgtcgccggccgaaaaggccaagcaacgcaaggaacgc
gacaaactgatgcgacggatgaagcggaaaaagggaaaacgctag
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