| Entry |
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| Symbol |
rpoB
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| Name |
(GenBank) DNA-directed RNA polymerase, beta subunit
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| KO |
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| Organism |
ccor Campylobacter corcagiensis
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:ccor00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CCORG_0402 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:ccor03021]
CCORG_0402 (rpoB)
03400 DNA repair and recombination proteins [BR:ccor03400]
CCORG_0402 (rpoB)
Enzymes [BR:ccor01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CCORG_0402 (rpoB)
Transcription machinery [BR:ccor03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CCORG_0402 (rpoB)
DNA repair and recombination proteins [BR:ccor03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CCORG_0402 (rpoB)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
358856..362992
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| AA seq |
1378 aa
MLNSLYSGNRLRIDFSKVKKEIEIPNLLQLQKKSFDSFLYPNSSDMSGIERVLKSIFPIH
DPQNRLSLEYAGYEILKPKYSVRECMERGLTYSVSLKMKIRLILYDKDEKTGDKVGVKDA
KEQEIFIRDIPLMTDRVSFIINGVERVVVNQLHRSPGVIFKEEESPTVANKRIYTAQIIP
DRGSWLYFEYDAKDVLYVRINKRRKMPITILFRALGYTKQDIIKLFYPIKTLHIENGKFL
TKFLPDEYSSRLEYDIKDPKGNVVHQAGKRLSKKKAVRLIEDGLDYVEYPVELLAERYIA
NPVFNAESGEILYDILSALDETKIAEILKTQKTITIANDLAKGVDNSIINAFLQDTESLK
ILAQTEGVDDENDLAAIRIYKVMRPGEPVVKEAARDFVRDLFFNPERYDLTKVGRMKMNH
KLGLNAPEYVTVLTSEDIIKTAKYLIGVKNGEGFIDDRDHLGNRRIRSIGELLANETHNG
LVRMQKTIRDKFTTLSSSIDELMPYDLINAKTITTALLEFYTGGQLSQFMDQTNPLSEVT
HKRRLSALGEGGLVKERAGFEVRDVHPTHYGRICPIETPEGQNIGLINTLATYAKVNDLG
FVEAPYKKVVEGKVVDEVVYLTATQEEGLVIAAASARLNEDGSFKDEILEARKNGETILV
KKDEVDLIDLCSGMVTGVAASLIPFLEHDDANRALMGSNMQRQAVPLLKATAPIVGTGME
ATIARDSWLAIKAKRAGVIEKVDSKNIFILGEDEKGPFIDHYLMEKNLRTNQNTMFSQHP
IVKKGDKVAQGQIIADGSSMEQGELAIGKNALIAFMPWHGYNYEDAVVMSEKMIRNDEYT
SVHIYEKEIDARELKDGVEEITKDIPNVKEEDLLHLDESGIVKIGTKIKAGMILVGKVTP
KGEVKPTPEERLLRAIFGEKAGHVVNKSLYATSSMEGVVVDVKIFTKKGYEKDSRTIESY
ESEKINLEKEHHDRLLMLDREETLKVTSLLSVKKLVKDGHLGKSEYKKGDIVTKEDLENS
NRFALNNFINSYDSKTIAEYDDIKNHFQNEKRKLKDEHDEKLEILEKDDILPSGVVKLVK
VYIATKRKLKVGDKMAGRHGNKGIVSTIVPEVDMPYLPSGKRVDIVLNPLGVPSRMNIGQ
IMESHLGLVGVKLGDEIERLLEEKQGEWLENLRNKMISIADTANLMDAKAELDNMDNETL
LKYARDWSRGVKFAVPVFEGIVPEDFTKLFELASIDPDGKTDLYDGRTGEKFKERVNVGC
MYYLKLHHLVDEKVHARSTGPYSLVTQQPVGGKALSGGQRFGEMEVWALEAYGAAYTLRE
MLTIKSDDVDGRLAAYKALIRGENVPSAGVPETFFVLTKELKSLALDIDIFKKVEGDE |
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| NT seq |
4137 nt +upstreamnt +downstreamnt
atgttaaattccctatattcaggaaaccgcctaagaattgatttttctaaggttaaaaaa
gagatagaaattccaaatttattacaattacaaaagaagagttttgatagttttttatac
ccaaatagctctgatatgagtggtatagaaagagtactaaagtcaatctttccaattcat
gatccgcaaaatagactaagcttagaatatgcaggatatgaaattttaaaacctaaatac
tcagttagagagtgtatggagcgcggtcttacatactcagttagtttaaaaatgaagatt
cgcttaatactatatgataaagatgaaaaaacaggcgataaagttggcgttaaggatgca
aaagagcaagaaatttttataagagatattcctttaatgaccgatagagtctcatttata
ataaatggtgttgaaagagttgtggttaatcaactacatagaagccctggtgtaatattt
aaagaagaagaaagcccaactgtagcaaataaaagaatctacacagctcaaattatacca
gatagaggtagttggctttattttgagtatgacgcaaaagatgttttgtacgttagaata
aataaacgccgtaaaatgcctataactatactatttagagcacttggttatacaaaacaa
gatattattaaactgttctatcctataaaaactctacatatcgaaaatggtaaatttctt
actaaatttctgccagatgagtatagctcaagacttgaatatgatataaaagatccaaag
ggaaatgttgttcatcaagcaggaaaaagactatctaagaaaaaagcagtaagacttatt
gaagatgggcttgattatgttgagtatccagttgagctgttagcagaaaggtatatcgct
aatcctgtgtttaatgcagaaagcggtgaaattttatacgatattttatctgctttagat
gagacaaaaatagctgaaattttaaaaactcaaaagaccataactatagcaaacgacctc
gcaaaaggcgttgataatagtattattaatgcctttttgcaagacacagaatcacttaaa
attttagctcaaactgaaggtgttgatgatgaaaatgatcttgcagctattagaatttat
aaagttatgagaccaggtgagccagttgtaaaagaagcagctagagattttgtaagagat
cttttctttaatcctgaaagatatgatttaacaaaagttggtcgtatgaagatgaaccat
aagttgggtcttaatgctcctgagtatgttacagttttaacaagtgaggatattattaaa
acagctaaatatctcatcggtgttaaaaatggtgaaggttttattgatgatagggatcac
cttggaaatagaagaattagatcaattggtgagcttttagcaaatgaaactcataacggc
ttagttagaatgcaaaaaacaattagggataaatttacaacactaagtagtagtattgat
gagcttatgccatatgatttaataaacgctaagaccataacaacagcattattagaattt
tatacaggtggacagttaagccagtttatggatcaaacaaacccactaagtgaagttaca
cataaaagaagactttcggctcttggtgagggtggtttggttaaagaaagagctggtttt
gaagttcgtgacgttcatccaactcactacggcagaatttgtcctattgaaactccagaa
ggtcaaaatataggtcttattaataccttagcaacttatgctaaagtaaatgatttagga
tttgtagaagctccttataaaaaggtagttgaaggtaaagttgttgatgaggtggtttat
ctaacagccactcaagaagaaggacttgtaattgcagcagcttcagctagacttaatgaa
gatggaagttttaaagatgaaattttagaagctagaaaaaatggtgaaacaattctagtc
aaaaaagatgaagtagacctaatagacctttgttctggtatggttacaggagttgcagct
tcattaatcccatttcttgaacatgatgatgcaaacagagcgttaatgggttcaaacatg
caacgccaagcagttccacttctaaaagccacagcgcctattgttggaacaggtatggaa
gcaactatcgctagagactcatggcttgctataaaagcaaaaagagctggtgttatagaa
aaggttgatagtaaaaatatatttatattaggtgaagatgaaaaaggtccttttatagac
cactacctaatggagaaaaatttaagaacaaaccaaaatacaatgttttcccagcaccct
atagttaaaaaaggagataaggtagctcaaggtcaaattatagctgatggttcaagtatg
gaacaaggcgagcttgcaatcggtaaaaacgctcttattgcatttatgccatggcatggt
tacaactatgaagatgcagttgtaatgagcgagaagatgattagaaatgatgagtataca
agtgttcatatctatgaaaaagagattgatgctagagagctaaaagatggtgttgaagag
ataacaaaagacattccaaatgtaaaagaagaagatttgcttcatcttgatgagagcggt
attgtaaagattggaactaagataaaagctggtatgattttggttggcaaagtcacacca
aaaggtgaggttaaaccaactccagaagaaagactcttaagagctatatttggtgaaaaa
gcaggtcatgttgtaaataaatcactatatgctacttcatctatggaaggtgttgtagta
gatgttaaaatttttacaaaaaaagggtatgaaaaagatagcagaaccattgaatcatat
gaaagtgaaaagataaatttagaaaaagagcatcacgacagacttttaatgcttgataga
gaagagactttaaaagttacttcacttttatctgttaaaaaattagtaaaagatggacat
ttaggtaaaagtgagtataaaaaaggtgatatcgttacaaaagaagatcttgaaaattct
aaccgttttgcactaaataactttataaattcttatgatagcaaaactatagctgagtat
gatgatataaaaaaccacttccaaaatgaaaaaagaaagcttaaagacgaacatgatgag
aagcttgaaattttagaaaaagatgatattttgccaagtggcgttgttaagcttgttaag
gtttatatcgcaaccaaaagaaaacttaaggttggtgataagatggcaggacgacatgga
aataaaggtatagtttcaactatagttccagaagttgatatgccatatcttccaagtgga
aaaagagttgatatagttttaaatccactaggcgttccaagtcgtatgaatattggtcaa
ataatggagagccacttaggacttgttggtgtaaagctaggagatgagatagaaagactt
ctagaagaaaaacagggtgaatggcttgagaatttaagaaataaaatgatatcaatagct
gacacagcaaatcttatggatgccaaagccgaacttgataatatggataatgaaacttta
cttaaatacgcaagagactggagtaggggagttaaatttgcagttcctgtttttgaagga
attgtacctgaggatttcactaaactatttgaattagcaagtatagatccagatggaaag
acagatttatatgatggcagaactggtgagaaatttaaagaaagagtaaatgtaggttgt
atgtattatcttaaacttcaccacttagtcgatgaaaaagttcacgcaagaagtactgga
ccatatagcttagttacacaacaacctgttggcggtaaggcactaagcggtgggcaaaga
tttggagagatggaagtttgggcattagaggcgtatggagcagcttacactctaagagag
atgcttacaataaaatcagacgatgttgatggcagacttgcagcttacaaagcactaata
cgaggtgaaaatgtaccaagtgcaggcgttccagagacatttttcgtgctaactaaagag
cttaaatctttagcacttgatatagatatatttaaaaaggtagagggcgatgagtga |
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