Campylobacter corcagiensis: CCORG_0403
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Entry
CCORG_0403 CDS
T06832
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ccor
Campylobacter corcagiensis
Pathway
ccor03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccor00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CCORG_0403 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccor03021
]
CCORG_0403 (rpoC)
03400 DNA repair and recombination proteins [BR:
ccor03400
]
CCORG_0403 (rpoC)
Enzymes [BR:
ccor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CCORG_0403 (rpoC)
Transcription machinery [BR:
ccor03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CCORG_0403 (rpoC)
DNA repair and recombination proteins [BR:
ccor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CCORG_0403 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
QKF64279
LinkDB
All DBs
Position
362985..367499
Genome browser
AA seq
1504 aa
AA seq
DB search
MSDFELEKIEVTENERPHDFDAVQIKLASPDEIRSWSHGEVKKPETINYRTLKPERDGLF
CAKIFGPVRDYECLCGKYKKMRFKGHKCEKCGVEITTSKVRRTRMGHIELVTPVAHIWYV
NSLPSRIATLLGIKMKDLERVLYYEAYIVDKEGEAFYDSENTKKVVKYDVLNEETYQRLE
KLYFNTGFSAKMGGEVIRDLLAELDLVEILVQLKEEMEATNSEAKKKNIIKRLKVVESFV
SSGNRPEWMMITALPVLPADLRPLVNLDGGKFAVSDVNDLYRRVINRNSRLKRLMELDAP
EIIIRNEKRMLQESVDALFDNGRRANAVKGANKRPLKSLSEIIKGKQGRFRQNLLGKRVD
FSGRSVIVIGPKLRMDQCGLPKTMALELFKPHLIARLQEKGYATTVKQAKKMIDDKVNEV
WECLEEVVKNYPVMLNRAPTLHKMSIQAFHPVLVEGKAIKLHPLVCAAFNADFDGDQMAV
HVPLSNESIAECKILMLSSMNILLPASGKAVSVPSQDMVLGIYYLSLEKEGAKGANKIYA
NVDEVMVSVDSGYLDIHAKIKTMVDGSTIFTTAGRLIIKSIVPDFIEESMWNRILKKKDI
ANLVDEVYKKGGLERTAKFLDDLKNLGFDSATKAGISIAMSDIITPDSKSKYINDAKDEV
KSIQSQYGAGLLTDNERYNKIVSVWTDTNKKIANEMMKSVKSDKGGFNSIYMMADSGARG
SAAQIRQLAGMRGLMAKPDGSIIETPIISNFREGLNVLEYFISTHGARKGLADTALKTAN
AGYLTRKLIDVGQNVKVTEEDCGTHEGIEITEITANGELVESLEDRILGRVLSDDIIDPI
TNEILFTAGTLIDEEKAKFISDSGIKSVNIRTPITCKAKKGVCAKCYGINLGEGKLVKPG
EAVGIIAAQSIGEPGTQLTLRTFHAGGTASAEQQDYQVVARKEGFVRYYNINTYLNNGKH
IVSNRRNAAILMVEPKIKAPFDGVLGIEVSHEDIFLTVKGSKDEAKFTIRKKNVAVATEL
AGVSGKIEGKFYLPFESGAKVKEDETIAEVIKEGWNIPTRIPYASEIKIADGEPVGQIIK
SGAKGTLKFFILKGDALQRVKTIKKGDEVVERGLFVVVADELGREATRYYIPRKSIIEFN
DNAKIKAGDVIARPAKDENTVIAEWDPYATPVIAESAGIVSFEDIEPGYTVAEQYDDLTG
TSRLVVNEYLPQGVKPTIIVATNSGELLKYQMEPKSVIHVSDGDEVKLADILAKTPKAVA
KSQDITGGLPRVSELFEARKPKNSAVIAEIDGVVRFDKPLRSKERIVIDSPDGSSAEYLI
DKNLQIQVHAGEFVHAGEKLTDGVVSSHEVLRVLGEKALHYYLISEIQQVYRGQGVAISD
KHIEIIVSQMLRQVRILDSGNTTFIVGDLISRRKFREENERIISMGGEPAIAEPILLGVT
RAAIGSDSFISAASFQETTKVLTESSIAGKFDHLEDLKENVILGRMIPVGTGLYKNHKIK
IKSN
NT seq
4515 nt
NT seq
+upstream
nt +downstream
nt
atgagtgattttgaattagaaaagattgaagttacagaaaacgaaagaccgcatgatttt
gatgcagtacagataaaacttgctagtcctgatgagataaggtcttggagtcatggtgag
gttaaaaagcctgaaaccataaactaccgtacattaaaaccagaaagagatggtctattt
tgtgctaaaatttttggaccagtaagggattatgagtgtctttgtggtaaatataaaaag
atgcgttttaaaggtcataagtgcgaaaaatgcggtgttgagataacaacttctaaagtt
agaagaactagaatgggtcatattgagctagtaactccagttgctcatatctggtatgta
aattcacttccaagtagaatcgcaactctacttggcataaagatgaaagatttagagcgc
gtactttactatgaagcttacattgtagataaagaaggcgaggcgttttatgatagtgaa
aacactaaaaaggtagtaaaatatgatgttttaaatgaagagacttatcaaagacttgaa
aaactatattttaataccggctttagtgcaaaaatgggtggagaagttataagagatctt
cttgctgagcttgatttggttgaaattctagttcagttaaaagaggagatggaagctact
aattcagaagctaaaaagaaaaatataatcaaaaggcttaaagttgtagaaagctttgta
tcttctggtaatcgtccagagtggatgatgataacagctcttcctgttcttccagcagat
cttaggccacttgtaaatttagacggtggtaaatttgcagttagtgatgtaaatgacctt
tatagaagagttattaatagaaactcaagacttaaaagacttatggaacttgatgcacct
gagattattatcagaaatgaaaaaagaatgcttcaagaatctgttgatgctttgtttgat
aatggtagacgtgcaaacgcagttaaaggtgcaaacaaacgtccacttaaatcattaagt
gaaattattaaaggcaaacaaggtcgctttagacaaaatcttcttggtaaaagagttgat
ttttctggtcgttctgttatagttataggtccaaaactaagaatggatcaatgtggtctt
ccaaaaacaatggccttagagctatttaaaccacatcttattgctagacttcaagaaaaa
ggttacgctacaacagttaagcaagctaaaaagatgatagatgataaggtaaatgaagtt
tgggagtgtttggaagaggttgttaaaaactacccagttatgctaaaccgtgcccctacg
cttcacaaaatgtccattcaagcctttcacccagttttggttgaaggcaaagctataaag
cttcatccgcttgtttgtgctgcatttaacgctgactttgacggcgatcaaatggctgtt
catgttcctttatcaaatgagtcaatcgcagagtgtaaaattttaatgcttagttcgatg
aatattcttcttccagcaagcggtaaggcagtatctgttccaagccaagatatggtttta
ggaatttactacctaagcttagaaaaagaaggcgcaaaaggagcaaataaaatttatgca
aatgttgatgaagttatggtatcagttgattctggatatcttgatattcatgcaaagatt
aagactatggttgatggaagtacgatatttacaacagcaggtaggcttatcatcaagtca
attgttcctgattttatagaagagagtatgtggaacaggatattaaagaaaaaagatatt
gcaaatttagttgatgaagtttataaaaaaggcggtctagaaagaactgctaaattccta
gatgatcttaaaaatttagggtttgattctgctacaaaagctggaatttcaattgcaatg
tctgatattattactcctgattcaaagagtaaatatataaatgatgcaaaagatgaggtt
aaaagtatccaaagtcaatacggtgcgggacttttaacagataatgaaaggtataataaa
atagttagcgtttggacagatactaacaaaaaaatagcaaacgagatgatgaaatcagta
aaatctgataaaggcggctttaactctatttatatgatggctgattctggagctagaggt
agtgcagctcaaatccgccaacttgctggtatgagaggacttatggcaaagcctgatgga
agtattattgaaacaccaattatctcaaactttagagaaggacttaatgttttagagtac
tttatatcaactcacggtgctagaaaaggtcttgctgatactgctttaaaaacagcaaat
gctggatatttaacaagaaagctaattgatgttggtcaaaatgttaaagtaactgaagaa
gattgtggaacccatgaaggtattgagattactgagattactgcaaatggcgaattagta
gagagtttggaagatagaattttaggaagagttttaagtgatgatattattgatcctata
acaaatgaaattttatttaccgcaggaactttgatagacgaagaaaaagctaaatttata
tcagatagtggaataaaatcagtaaatattagaactcctataacttgtaaagccaaaaag
ggcgtttgtgcaaaatgttatggtattaaccttggtgagggtaaacttgtaaaaccgggt
gaagcagtaggaattattgctgctcaatcaattggcgagccaggaactcagctaactctt
agaactttccacgctggtggtacagcttcagcagaacaacaagattatcaagttgttgct
agaaaagagggctttgtaaggtattataatatcaatacctatttaaataacggcaaacat
atagtttcaaacagaagaaatgccgctattttgatggttgaaccaaagataaaagcacca
tttgatggagttttaggtattgaagtatctcatgaagatatatttttaaccgttaaggga
tcaaaagatgaggctaaatttaccataagaaagaaaaatgttgctgttgcaactgagctt
gctggtgtttctggtaagatagagggtaaattttacttgccatttgaaagtggagctaaa
gtaaaagaagatgagactatagctgaggttattaaggaaggttggaatattcctactcgt
ataccttatgcaagtgagataaaaatagcagatggtgaaccagttggtcagattatcaaa
tcaggagcaaagggaactcttaaatttttcatcttaaaaggtgatgctttacaaagagtt
aaaactatcaaaaaaggtgatgaggtagtagaaagaggactttttgttgttgttgctgat
gagcttggaagagaggctacaaggtattatataccaagaaaatctatcatagaatttaat
gacaatgctaagatcaaagcaggagatgttatagctagaccagctaaggatgaaaatacc
gtaatagctgagtgggatccatacgctactccagttattgctgagagcgctggtattgtt
agttttgaagatatagagcctggttatactgtggctgaacagtatgatgatttgactgga
acaagcagactcgttgttaatgaatacttgccacaaggtgttaagccaactatcatagtt
gcaactaatagtggggagcttttaaaatatcaaatggagccaaaaagtgttattcatgtt
agtgatggagatgaggtaaaacttgctgatatactagctaaaactccaaaagcagtagct
aaatctcaagatattactggaggtcttccacgcgttagtgaacttttcgaagctagaaaa
ccaaaaaattcagccgttattgctgagatagatggtgtggtaagatttgataaaccactt
cgttcaaaagagagaattgtcatagactctccagatggaagtagtgcagagtatttaata
gataaaaaccttcaaattcaagttcatgctggagagtttgttcacgctggtgaaaaacta
acagatggcgttgtaagtagtcacgaagttttaagggttttaggtgaaaaagcacttcat
tattatttgataagtgaaattcagcaagtttatcgtggtcaaggtgttgccataagtgat
aagcacattgagattattgtttctcaaatgcttagacaggttagaattttagatagtgga
aatacaacttttatagtgggtgatctaattagcagacgaaaatttagagaagaaaacgaa
agaattatcagtatgggtggtgagcctgcgattgctgagccaatacttcttggcgttaca
agagcagctattggaagtgatagttttatctcagctgcatcattccaagagacaacaaaa
gttctaacagagtcaagtatagcaggtaaatttgaccatcttgaagatcttaaagaaaat
gtcatcttaggtagaatgattcctgttggaacaggtctttataaaaatcataagattaag
atcaaatctaactaa
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integrated database retrieval system
