Campylobacter corcagiensis: CCORG_0955
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Entry
CCORG_0955 CDS
T06832
Symbol
trmA
Name
(GenBank) tRNA m5U54 methyltransferase
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
ccor
Campylobacter corcagiensis
Brite
KEGG Orthology (KO) [BR:
ccor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccor03016
]
CCORG_0955 (trmA)
Enzymes [BR:
ccor01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
CCORG_0955 (trmA)
Transfer RNA biogenesis [BR:
ccor03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
CCORG_0955 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_15
Methyltransf_25
TRM5-TYW2_MTfase
Methyltransf_31
RPW8
Methyltransf_11
Methyltransf_4
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
QKF64808
LinkDB
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Position
complement(927610..928719)
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AA seq
369 aa
AA seq
DB search
MKNSHCKHLKECASCTFDTSYDEQIGLKKDFIASKFSKFYKGEFKVFRSKTKHYRCRAEF
GIYHENDRLSYTMNGLNTKYLKIDECPKVDEKIANLMPNLLKNLEKDEKLKFKLFGVEFV
ATSSDILAILLYHKDINSIKDELLNLAKILDINLIARSRGKKLVFGSEILNDTLNIKDKI
YHYKFESGAFLQPNKAINEAMISFISDNIKAPKDLLEMYCGHGNFTIPLSFKFRRVLANE
ISKSSIKNATLNCELNGVSNINFLRMSSEELIRAFGGESFRRLSGVNLNEFDFSHILVDP
PRAGLDKSVINFIKNHENIIYISCNPLTLEENLNDLCKTHEVINFAIFDQFVHTKHIECG
VILRRKDDI
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaatagccattgtaaacatttaaaagagtgtgctagttgcacttttgatacttct
tatgatgagcaaatagggcttaaaaaggattttatagcttcaaaatttagtaagttttat
aagggtgagtttaaggtttttagatcaaaaacaaagcactatagatgtagggctgagttt
ggaatttatcacgaaaatgacagactttcttatactatgaatggcttaaatactaagtat
ttaaagatagatgagtgtccaaaagttgatgaaaaaatagcaaatttaatgccaaattta
cttaaaaatttagaaaaagatgaaaagctaaaatttaaactctttggagttgagtttgta
gctacaagtagcgatattttagctattttgctatatcataaagatataaactcaatcaaa
gatgagctattaaatttagctaaaattttagatataaatttaatagcaagaagcaggggc
aaaaagctagtttttggaagtgaaattttaaatgatactctaaatataaaggataaaatt
tatcactataaatttgaaagtggggcgtttttacaaccaaataaagccataaatgaagca
atgattagttttatatctgataatattaaagctccaaaggatctccttgagatgtattgt
gggcatggaaattttaccattccacttagctttaaatttaggcgtgttttagcaaatgag
ataagcaaaagctcaatcaaaaacgctactttaaactgtgagttaaatggcgttagtaat
ataaattttcttagaatgagtagcgaagaactgattagagcttttggtggagagagtttt
agaagactatctggggttaatttaaatgagtttgattttagtcatattctagttgacccg
ccccgtgctgggcttgataaaagcgttataaattttataaaaaatcatgaaaatataatt
tatatttcgtgtaatcctttgactttagaggagaatttaaatgatctttgtaaaactcat
gaagttataaattttgctatttttgatcagtttgtgcatactaagcacattgagtgtggt
gtgatattaaggagaaaagatgatatttga
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