KEGG   Campylobacter corcagiensis: CCORG_0995
Entry
CCORG_0995        CDS       T06832                                 
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma70 factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
ccor  Campylobacter corcagiensis
Brite
KEGG Orthology (KO) [BR:ccor00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    CCORG_0995 (rpoD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccor03021]
    CCORG_0995 (rpoD)
Transcription machinery [BR:ccor03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CCORG_0995 (rpoD)
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 Sigma70_r4_2 SieB MCR_beta_N
Other DBs
NCBI-ProteinID: QKF64848
LinkDB
Position
964429..966288
AA seq 619 aa
MATTKKTTTVKELNASIEELFEENKKSFVTYEKLIKLFSKTPTATNVKKIESLMEKYEIT
LLSSAKAAEIKNIEDAKKRADEARAYIENNKDENFDIANDSEILEWGRSDSPVRMYLREM
GAIDLLDKDEEVEISKQIELGEDIIIDAFCSVPYLIDFILDYKEPLINRERRVKELFKSF
DDDGSDEEEEEEEFSEEESKTPAKKNLDKRSLRVIESFKELEKAKKDWMRYASKNKDEIS
EGDSLFEILNLAYKKKILKQKLMDLGPTSKLINEIVKSMETALKSDTEFDKELKRLEYKL
PLFSPELKANHAKILKDITKLSKEEITERVPEATMVSTYMDIKKLFQTKEASKDSFDMQP
ERLGVILEQIKRGKNISDKAKGKMAKSNLRLVVSIAKRYTNRGLPFLDLIQEGNIGLMKA
VDKFEYKKGYKFSTYATWWIRQAISRAIADQARTIRIPIHMIETINRINKITRKHIQETG
KEPDIQFIADEIGLSVDKVKQVIKITKEPVSLEAPIGNEDDGKFGDFVEDKSTISPMDNV
LKDDLKEQIEEVLEQLNEREKAVIRMRFGLLDDESDRTLEEIGKELNVTRERVRQIESSA
IKKLKHPKVGRKLKNYIEG
NT seq 1860 nt   +upstreamnt  +downstreamnt
atggctacaactaagaaaactaccaccgttaaagagttaaacgcaagtattgaagagctt
tttgaggagaacaaaaagagctttgtaacttatgaaaaacttataaaactttttagtaaa
acaccaacagctacaaatgttaaaaaaattgaaagtctaatggaaaaatatgaaattacg
cttttatcatccgcaaaagctgctgaaatcaaaaacatagaagatgcaaaaaagcgtgct
gatgaagcaagagcttacatagaaaataacaaagatgaaaacttcgatatagcaaatgac
agtgaaattttagagtggggaagaagtgatagtcctgtgagaatgtatcttcgtgagatg
ggcgctattgatctacttgataaagatgaagaggtagaaataagcaagcaaattgaactt
ggtgaagatattataatagatgcattttgttctgtgccgtatttgattgattttattttg
gactataaagagcctcttataaacagagaaagacgcgtaaaagagctttttaaaagtttt
gatgatgatggaagcgatgaagaagaggaagaagaggaatttagcgaagaagagtcaaaa
actcctgctaagaaaaatcttgataaaagatcccttagagtaatcgaaagctttaaagag
ttagaaaaagctaaaaaagactggatgagatatgctagtaaaaataaagatgaaattagc
gaaggcgatagtctttttgagatactaaatttagcatataaaaagaagatattaaaacaa
aaacttatggatcttggtccaacaagtaaacttataaatgagatagtcaaatcaatggaa
acagctcttaaaagcgacacagaatttgataaagagctaaaaagacttgagtacaaactt
ccactttttagtccagaacttaaagcaaatcacgccaaaattttaaaagatatcactaaa
cttagcaaagaagagataactgaaagagttccagaagctactatggtgtcaacatatatg
gatataaaaaagcttttccaaacaaaagaggctagtaaagatagctttgatatgcaacca
gaaagacttggggttattttagaacaaattaaacgcggtaaaaatatctctgataaagca
aaaggtaaaatggcaaagtcaaatttacgccttgttgtaagtattgctaaacgctacacc
aaccgcggacttccatttttagatcttattcaagaaggaaatataggtcttatgaaagca
gttgataaatttgagtataaaaaagggtataaattttcaacttatgctacttggtggatt
cgtcaagccatatcaagagcgattgctgatcaagcaagaacgataagaattcctatccat
atgatagagacgataaatcgcataaataaaatcacaagaaaacacatacaagaaacagga
aaagagccagatatacagtttattgctgatgagattggtttaagtgtagataaagttaag
caagttattaaaataacaaaagaaccagttagtcttgaagcacccattggaaatgaagat
gatggtaaatttggagattttgtagaggataaaagcacaatctcgccgatggataatgtc
ttaaaagatgacttaaaagagcaaattgaagaggttttagaacaactcaatgagcgagaa
aaagctgtcattagaatgcgttttggacttttagatgacgaaagtgatagaacacttgaa
gagataggaaaagagctaaatgttactcgtgagagagttcgccaaatagaaagctcagct
atcaaaaaactaaaacaccctaaagttggcagaaaacttaaaaactacatagagggctaa

DBGET integrated database retrieval system