Campylobacter corcagiensis: CCORG_0995
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Entry
CCORG_0995 CDS
T06832
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma70 factor
KO
K03086
RNA polymerase primary sigma factor
Organism
ccor
Campylobacter corcagiensis
Brite
KEGG Orthology (KO) [BR:
ccor00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CCORG_0995 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccor03021
]
CCORG_0995 (rpoD)
Transcription machinery [BR:
ccor03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CCORG_0995 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
SieB
MCR_beta_N
Motif
Other DBs
NCBI-ProteinID:
QKF64848
LinkDB
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Position
964429..966288
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AA seq
619 aa
AA seq
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MATTKKTTTVKELNASIEELFEENKKSFVTYEKLIKLFSKTPTATNVKKIESLMEKYEIT
LLSSAKAAEIKNIEDAKKRADEARAYIENNKDENFDIANDSEILEWGRSDSPVRMYLREM
GAIDLLDKDEEVEISKQIELGEDIIIDAFCSVPYLIDFILDYKEPLINRERRVKELFKSF
DDDGSDEEEEEEEFSEEESKTPAKKNLDKRSLRVIESFKELEKAKKDWMRYASKNKDEIS
EGDSLFEILNLAYKKKILKQKLMDLGPTSKLINEIVKSMETALKSDTEFDKELKRLEYKL
PLFSPELKANHAKILKDITKLSKEEITERVPEATMVSTYMDIKKLFQTKEASKDSFDMQP
ERLGVILEQIKRGKNISDKAKGKMAKSNLRLVVSIAKRYTNRGLPFLDLIQEGNIGLMKA
VDKFEYKKGYKFSTYATWWIRQAISRAIADQARTIRIPIHMIETINRINKITRKHIQETG
KEPDIQFIADEIGLSVDKVKQVIKITKEPVSLEAPIGNEDDGKFGDFVEDKSTISPMDNV
LKDDLKEQIEEVLEQLNEREKAVIRMRFGLLDDESDRTLEEIGKELNVTRERVRQIESSA
IKKLKHPKVGRKLKNYIEG
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggctacaactaagaaaactaccaccgttaaagagttaaacgcaagtattgaagagctt
tttgaggagaacaaaaagagctttgtaacttatgaaaaacttataaaactttttagtaaa
acaccaacagctacaaatgttaaaaaaattgaaagtctaatggaaaaatatgaaattacg
cttttatcatccgcaaaagctgctgaaatcaaaaacatagaagatgcaaaaaagcgtgct
gatgaagcaagagcttacatagaaaataacaaagatgaaaacttcgatatagcaaatgac
agtgaaattttagagtggggaagaagtgatagtcctgtgagaatgtatcttcgtgagatg
ggcgctattgatctacttgataaagatgaagaggtagaaataagcaagcaaattgaactt
ggtgaagatattataatagatgcattttgttctgtgccgtatttgattgattttattttg
gactataaagagcctcttataaacagagaaagacgcgtaaaagagctttttaaaagtttt
gatgatgatggaagcgatgaagaagaggaagaagaggaatttagcgaagaagagtcaaaa
actcctgctaagaaaaatcttgataaaagatcccttagagtaatcgaaagctttaaagag
ttagaaaaagctaaaaaagactggatgagatatgctagtaaaaataaagatgaaattagc
gaaggcgatagtctttttgagatactaaatttagcatataaaaagaagatattaaaacaa
aaacttatggatcttggtccaacaagtaaacttataaatgagatagtcaaatcaatggaa
acagctcttaaaagcgacacagaatttgataaagagctaaaaagacttgagtacaaactt
ccactttttagtccagaacttaaagcaaatcacgccaaaattttaaaagatatcactaaa
cttagcaaagaagagataactgaaagagttccagaagctactatggtgtcaacatatatg
gatataaaaaagcttttccaaacaaaagaggctagtaaagatagctttgatatgcaacca
gaaagacttggggttattttagaacaaattaaacgcggtaaaaatatctctgataaagca
aaaggtaaaatggcaaagtcaaatttacgccttgttgtaagtattgctaaacgctacacc
aaccgcggacttccatttttagatcttattcaagaaggaaatataggtcttatgaaagca
gttgataaatttgagtataaaaaagggtataaattttcaacttatgctacttggtggatt
cgtcaagccatatcaagagcgattgctgatcaagcaagaacgataagaattcctatccat
atgatagagacgataaatcgcataaataaaatcacaagaaaacacatacaagaaacagga
aaagagccagatatacagtttattgctgatgagattggtttaagtgtagataaagttaag
caagttattaaaataacaaaagaaccagttagtcttgaagcacccattggaaatgaagat
gatggtaaatttggagattttgtagaggataaaagcacaatctcgccgatggataatgtc
ttaaaagatgacttaaaagagcaaattgaagaggttttagaacaactcaatgagcgagaa
aaagctgtcattagaatgcgttttggacttttagatgacgaaagtgatagaacacttgaa
gagataggaaaagagctaaatgttactcgtgagagagttcgccaaatagaaagctcagct
atcaaaaaactaaaacaccctaaagttggcagaaaacttaaaaactacatagagggctaa
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