Campylobacter corcagiensis: CCORG_1336
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Entry
CCORG_1336 CDS
T06832
Name
(GenBank) DNA topoisomerase IA
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ccor
Campylobacter corcagiensis
Brite
KEGG Orthology (KO) [BR:
ccor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccor03032
]
CCORG_1336
03400 DNA repair and recombination proteins [BR:
ccor03400
]
CCORG_1336
Enzymes [BR:
ccor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CCORG_1336
DNA replication proteins [BR:
ccor03032
]
Prokaryotic type
DNA Topoisomerases
CCORG_1336
DNA repair and recombination proteins [BR:
ccor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CCORG_1336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
DUF6293_C
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QKF65179
LinkDB
All DBs
Position
complement(1308279..1310234)
Genome browser
AA seq
651 aa
AA seq
DB search
MQNTIIIIESPNKCDKIAKITGAKVYATQGHFKTLSKKIVKDYQSYEPIFEFKDGSAKNR
MNIVFNDCKGKDVIIATDPDREGYGIGYMVYEVIKNIAKSIKRAEFHEITESGIKKGLDK
AVPFANSNLKEFDSFKARAVGDKLVGFIMSPKYINKLNDKNMSVGRVQTPALALVVKREL
EIKDFEANPASKQISYKIKAKLKTKDGVEFIATNDNIFPNKEEAETKIEELNTSTAKVYQ
IDTKQSQIKPPAPLRTSQLQELANKKLGFSSDKTMGLAQKLFEKGLITYHRTDSNTISDE
FINEVNAKFKDQEWYEKREYKAGAQSQAEAHEAIRISHVHEYGEINEITAKENASDDEKV
LYELIYLNSIQSQAKNAINENTTYDISIKTLSFKTKTSKCIYKGFKGALKEEIEDDEDKD
KETLEIALNLKQGDELEIVGFELGEVKKQAPQRYKESNFISLLEKAGIGRPSTYATFLPI
LLRRDYIEIQKKGKNANIVATNKGINFIQTIMNDDEWISQSEFTKQMESVLDEISDGKVG
YLDFMKPLHEKMGFEEPSSGETKPPSEKQLQWAKNLATNLNIELPKDIEKSWKICSEFID
KNKDKDIRPPSEKQLALAKKLAENNNVELPKDVEKNVKECSKFIDKYIKKK
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacacaataattataattgaaagcccaaataagtgcgataaaatagcaaaaatt
acaggtgcaaaagtttatgccacacaagggcattttaagactttatcaaaaaagatagta
aaagattatcaaagttatgagccaatttttgaatttaaagatggcagtgctaaaaataga
atgaatatagtttttaatgattgtaaaggcaaagatgtaattattgcaacagatcctgat
agagagggctatggcataggttatatggtttatgaagttattaaaaacatagcaaaaagc
attaaaagggcagaatttcatgagataacagaaagtggaattaaaaaaggacttgataaa
gctgtgccatttgcaaactcaaatttaaaagaatttgatagctttaaggcaagagcagtt
ggagataagcttgttggctttataatgagtccaaaatacataaacaaactaaatgataaa
aatatgagtgtaggaagagttcaaactccagcacttgcattggtggtaaaaagagagttg
gaaattaaagattttgaagcaaatccagcctcaaaacaaataagctataaaattaaagca
aaactaaaaacaaaagatggtgtagagtttatagcaacgaatgataacatctttccaaac
aaagaagaagcagagacaaaaatagaagaattaaacacaagcaccgcaaaagtatatcaa
atagatacaaaacagagccaaataaagccaccagcaccgctaaggactagccaattacaa
gaattggcaaataaaaagttaggttttagttctgataaaacaatgggactagctcaaaaa
ttatttgaaaaaggattaattacatatcataggacagatagcaatacaatatctgatgaa
tttataaatgaagtaaatgctaaatttaaagatcaagagtggtatgaaaaaagggagtat
aaagcaggagctcaaagccaagccgaagctcacgaagctataagaatatcacatgtgcat
gagtatggtgaaattaatgagataacagccaaagaaaatgcgagtgatgatgaaaaggtg
ttatatgagttaatttatctaaattcaatacaaagtcaagcaaaaaatgcaattaatgaa
aatactacctacgatataagcataaaaacattaagttttaaaacaaaaacaagtaaatgc
atttataagggctttaaaggggctttaaaagaagaaatagaagatgatgaagacaaagac
aaggaaacactagaaatagccttaaatttaaagcaaggcgatgaattagagatagtaggc
tttgaacttggagaagttaaaaaacaagcaccacaacgatacaaagaaagcaattttatc
tcccttttagaaaaggcaggtatcggaagacctagtacatatgctacatttttaccgatt
ttactaagaagagattatatagaaattcaaaaaaagggaaaaaatgcaaatatagtggca
acgaataagggtataaattttattcaaactataatgaacgatgatgagtggatatctcaa
agcgaattcacaaaacaaatggaaagtgtgctagatgaaataagcgatggaaaagttgga
tatttagattttatgaagccactacatgaaaaaatggggtttgaagaaccaagcagtgga
gaaactaaaccaccaagcgaaaaacaactacaatgggctaaaaatctagctacaaattta
aacatagaactaccaaaagatatagaaaagagttggaaaatatgttctgaatttatagac
aaaaataaagataaagatattcgtccaccaagcgaaaaacaacttgcattagcaaaaaag
ttggcagaaaataacaatgttgagcttccaaaagatgtagaaaaaaatgttaaagagtgc
tctaaatttatagataaatatataaagaaaaaataa
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