Campylobacter corcagiensis: CCORG_1613
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Entry
CCORG_1613 CDS
T06832
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ccor
Campylobacter corcagiensis
Pathway
ccor03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccor00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CCORG_1613 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccor03021
]
CCORG_1613 (rpoA)
03400 DNA repair and recombination proteins [BR:
ccor03400
]
CCORG_1613 (rpoA)
Enzymes [BR:
ccor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CCORG_1613 (rpoA)
Transcription machinery [BR:
ccor03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CCORG_1613 (rpoA)
DNA repair and recombination proteins [BR:
ccor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CCORG_1613 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
QKF65444
LinkDB
All DBs
Position
complement(1577061..1578065)
Genome browser
AA seq
334 aa
AA seq
DB search
MRKITTSAYMPTEIRVENVSENVAKVIAYPFETGYAVTVAHPLRRLLYTSSVGFAPTAVK
IEGVEHEFDSIRGMLEDVAIFIINLKNLRFKIKGDSKREILEYSFKGPAEIRGKDLANDV
VDIVNPDHYIATLNEDADLKFKVIVEKGIGYVPSEELADYIDSDYMALDAFFTPVKRAIY
DIENILVEDNPDYEKIIFTITTNGQVDPITAFKNALEAMYQQLSVFGGIVDIEIPSAPIS
TSQSSEHAKLFENIENLNLSARSFNCLDRAGIKFIGELVLMEEGELKDIKNLGKKSLEEI
KAVMEDIGYPIGDMSLSDQKDGLLRKINELKKQG
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagattacaacatcagcatatatgccaaccgagataagagttgaaaatgttagt
gaaaatgtggcaaaagttatagcatacccgtttgagacgggttatgctgtgacagttgca
catccacttagaaggcttttatatacaagttctgttggttttgcacctactgctgttaag
atagaaggagttgaacatgagtttgactctattcgaggaatgcttgaagatgttgctata
tttatcataaatttaaaaaacttaagatttaagattaaaggtgactcaaaaagagaaatt
ttagagtatagcttcaaaggacctgctgagattagaggcaaagatttagcaaatgatgta
gttgatattgtaaatccagatcactatatcgccacactaaatgaagatgccgatcttaaa
tttaaagtcattgttgaaaaaggtattggatatgttccaagtgaagagttggctgattat
atagattctgactatatggcacttgatgcattttttacgcccgtaaaaagagctatttat
gatatagaaaatatcttagttgaggataatcctgactatgaaaagattatatttaccatc
acaacaaatggtcaagttgatcctattacagcgtttaaaaatgctttagaagctatgtat
caacaactttcagtttttggtggtattgtggatattgaaattccatctgcgccgatttca
acaagtcaaagtagtgaacacgctaagctttttgaaaatattgaaaacctaaatttaagt
gctagaagctttaactgcctagatagagcaggtattaaatttataggtgaacttgtcttg
atggaagaaggtgagcttaaagatatcaaaaatttaggtaaaaaatccctagaggagata
aaagcagttatggaagatattggctatcctatcggcgatatgtctctatctgatcaaaaa
gatggactgctaagaaagataaatgaattaaaaaaacaaggataa
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