Campylobacter corcagiensis: CCORG_1684
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Entry
CCORG_1684 CDS
T06832
Symbol
recJ
Name
(GenBank) single-stranded DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ccor
Campylobacter corcagiensis
Pathway
ccor03410
Base excision repair
ccor03430
Mismatch repair
ccor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CCORG_1684 (recJ)
03430 Mismatch repair
CCORG_1684 (recJ)
03440 Homologous recombination
CCORG_1684 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccor03400
]
CCORG_1684 (recJ)
DNA repair and recombination proteins [BR:
ccor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CCORG_1684 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CCORG_1684 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CCORG_1684 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
DUF2070
Motif
Other DBs
NCBI-ProteinID:
QKF65512
LinkDB
All DBs
Position
complement(1630514..1632094)
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AA seq
526 aa
AA seq
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MRQILGKREVRAILEKRFENDIHTKISQIPLPCHLKDTYKASSRIKTAIENNERIAIVGD
YDVDGIVSSVILAEFFDLLGAIYRVKIPNRFSDGYGLNPKVLDDLDDVTLIITVDNGISA
VEAANECKKRGIDLIITDHHMPPPTLPDAYAIINPKQHECPFPNVEICGAEVAWYLVGAL
KEVCAIEYDMSSQLDLLVMAIIADMMELRDLNRVLVKMGIKKLNSSKRPCFGVIKNYYNK
DSFEFDDISFLIAPLINATGRMSDATLSYKFLRSKSYKEANAFFEKILALNHSRKAEEKN
LYECSLPNISENDEIIVTWGNNWHEGVIGIVASRLTKVYKKPAIVFSVDEHRAKGSARSV
GKFDILRLIAMQKELLLSFGGHKGAAGIVIEPSKLEEFKVAINSACFLQDIDISPYSDEI
LGEIDLKEVDLEMLDILEFFEPYGQKNPKPIFSISSALVKSVRMIGKEANHLKITVEKDG
TTKDALFFNYDIKPKEGDSVSFIATIIKNSFKGKITPEFVIKEILE
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgcggcaaattctaggtaaaagagaagttagggcgattttagaaaaaagatttgaaaat
gatattcacacaaaaatttcacaaatcccccttccttgtcacttaaaggatacctacaag
gcatcaagtcgtataaaaactgctatagaaaataacgaacgcattgctattgtaggggat
tatgatgttgatggcatcgtaagtagtgtgatattagctgagttttttgatcttttagga
gctatttatagggttaaaattccaaatagatttagcgatggatatggtttaaatcctaaa
gttttagatgatttagatgatgttacactcattattacagtcgataatggaataagtgca
gttgaagcagcaaatgagtgtaaaaaaagaggaattgatttaatcataactgatcaccat
atgccaccccctactctacctgatgcatatgctattatcaacccaaagcaacatgagtgt
ccatttccaaatgttgaaatttgcggtgctgaggtggcatggtatctggttggagcgtta
aaagaggtgtgtgctatagagtatgatatgagctcacagcttgatcttttagtaatggcg
ataattgctgatatgatggaacttagagacctaaatagagtgcttgtaaaaatgggtata
aaaaagctaaattcatcaaaacgcccctgctttggggttataaaaaactactacaacaaa
gatagctttgaatttgatgatataagttttttaattgctcctttgataaatgcaactggc
aggatgagtgatgctacgctatcatataaatttcttcgttctaaaagttacaaagaggca
aacgccttttttgagaaaattctagcactcaatcacagcagaaaagctgaagagaaaaat
ctttacgagtgctcgcttccaaatattagcgaaaatgacgagataattgtaacttggggt
aataattggcatgaaggggttattggaatcgttgcttcaaggcttactaaggtttataaa
aaaccagccattgtttttagcgtagatgagcaccgcgcaaaaggaagtgcaagaagtgtg
ggcaaatttgatatattgcgtcttattgctatgcaaaaagagctgcttcttagctttggt
gggcataaaggtgctgctggtattgtgatagaaccttcaaaacttgaggaatttaaagtt
gctataaattctgcttgttttcttcaagatatagatatatcgccatatagcgatgaaatt
ttaggcgagatagatttgaaagaagttgaccttgagatgcttgatattttagagtttttt
gagccatatggacagaaaaacccaaagccaatatttagtataagtagtgccttagtcaaa
agcgtaagaatgataggaaaagaggcaaatcaccttaagattacagttgaaaaagatggt
actacaaaagatgctctgttttttaactacgatataaagccaaaagaaggagatagtgta
agttttatagctactattataaaaaattcatttaaaggtaaaatcacccctgagtttgtt
ataaaagagattttggagtaa
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