Caulifigura coniformis: Pan44_01040
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Entry
Pan44_01040 CDS
T09806
Symbol
sigW_2
Name
(GenBank) ECF RNA polymerase sigma factor SigW
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
ccos
Caulifigura coniformis
Brite
KEGG Orthology (KO) [BR:
ccos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccos03021
]
Pan44_01040 (sigW_2)
Transcription machinery [BR:
ccos03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Pan44_01040 (sigW_2)
BRITE hierarchy
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_16
Motif
Other DBs
NCBI-ProteinID:
QDT52095
UniProt:
A0A517S7K4
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All DBs
Position
complement(106632..107234)
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AA seq
200 aa
AA seq
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MTLSDGDLLASIQRGDDPAFAELVDRYRPRLLRFAVRSTGDAALAEDLVQETFAAVYAAS
ASYDARFAVSTWIWTILLNLCRRFRRGQRSRERLHTAWAAAMANRPRPDDTAIDDLVRDE
QARLLRLQLARLPAAQADALRLRFFAELSFDEIAATMNSSVSGAKVRVRKGLTALSEQLR
RDEAAEYVTAAPAVLKDDVT
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgtcggacggcgatcttctggcctcgatccagcgcggcgacgaccccgcgttc
gccgagcttgtcgaccgctaccgaccccgactcctgcggttcgccgtccgctctacgggc
gatgcggccctcgcggaagacctcgttcaggaaacgttcgcagccgtctacgcggccagc
gccagctacgacgcgcggttcgccgtcagcacctggatctggacgattctcctcaatctc
tgccgacggtttcgccgcggacaacgctcccgcgaacggctgcacaccgcctgggccgcc
gcaatggcgaatcgcccccggcctgacgacacggccatcgatgacctcgtacgggacgag
caggcgcgactgctccgcctccagctggcccggcttcccgcagcgcaggccgacgcgctt
cgattgcgatttttcgcagagctgtcgttcgatgagattgccgcgacgatgaactcgagt
gtgagcggcgcgaaggtccgcgttcgcaaagggctgaccgccctgtcggaacaactgaga
cgggacgaggccgcggaatacgtcaccgctgcgcctgcagtcctgaaggacgatgtgaca
tga
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