Caulifigura coniformis: Pan44_03180
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Entry
Pan44_03180 CDS
T09806
Symbol
sigA_2
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
ccos
Caulifigura coniformis
Pathway
ccos02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ccos00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Pan44_03180 (sigA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccos03021
]
Pan44_03180 (sigA_2)
Transcription machinery [BR:
ccos03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Pan44_03180 (sigA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
HTH_Crp_2
Mod_r
Motif
Other DBs
NCBI-ProteinID:
QDT52309
UniProt:
A0A517S854
LinkDB
All DBs
Position
complement(378134..379843)
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AA seq
569 aa
AA seq
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MHRLDQGLKSLLDQAKERGFLTYQMVHKYLPDEGGEAAMIDQIILGLEELQLPLINDPAA
PRTIADKIRAEQKSTHVEAPDLTRGLIEPETPMSSRDPIRMYLSQMGNIPLLSRDDEIFL
AKQIEITRKRYRRAMMESDFAIATAVDILEKVQTGELPFERTLRTSDTENTHKDQILGRM
PHNLPTLKYLLGENRKDWELSRDESESKKDRDSAKRRMIVRRRKMCSLAEELSVRTHRLT
PVYKRMQQINERMIELEKDIHHLRNRVSAQKDVQLMHQELGELVELCCETPAEFKARMIR
IRDRFDAWTDAKQQLSGGNLRLVVSIAKKYRNRGLSFLDLIQEGNAGLMRGVEKYEYRRG
YKFSTYATWWIRQAITRAVADHARTIRIPVHMFQSISTLKAKSEEIRQKTGREPTTEELA
AAVGLSVEETERIMKTWKHPISLDTPVGESEDSSYGDFLEDTTENTPADSAMHQMLRDKI
NHVLKSLTYREREIIKLRYGLGDGYSYTLEETGRIFKVTRERIRQIESKALRKLQQQTRA
THLKGFVESILTSEGGAVIVEESEELSVV
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
gtgcatcggctggaccagggattgaagtcgttgttggatcaggccaaggaacgtggcttt
ctgacctatcagatggtccacaagtatctccccgatgaagggggcgaggcggcgatgatc
gaccagatcattctcggccttgaagaactccagctgccgctgatcaacgacccggctgcc
ccgcggacgattgccgacaagattcgcgcggagcagaagagcacgcacgtcgaggcgccg
gacctgacgcgcgggctgatcgaacccgagacgcccatgtcgtcccgcgatccgatccgc
atgtacctgtcgcagatgggcaacattccgctgctctcccgcgacgacgaaatcttcttg
gccaagcagatcgagatcacccgcaagcgctaccgccgcgccatgatggagtcggatttc
gcgatcgcgacggccgtcgacattctcgaaaaggtgcagaccggcgaactgccgttcgag
cggacccttcgcacgagcgacaccgagaacacccacaaggaccagattctcggccggatg
cctcacaacctgccgacgctgaagtacctccttggggagaaccgcaaggactgggaactt
tcccgcgacgaatcggaatcgaagaaggaccgcgactcggcgaagcgtcggatgatcgtc
cgccgccgcaagatgtgttcgctggcggaagagctttctgtccggacccatcgcctgacg
cccgtgtacaagcggatgcagcagatcaacgaacggatgatcgagctggagaaggacatc
caccatctccggaaccgcgtgtcggcccagaaagacgtccagctgatgcaccaggagctg
ggcgagctggtcgagctgtgctgcgaaacgccggccgagttcaaggcccgcatgatccgc
atccgcgatcgcttcgacgcctggaccgacgccaagcagcagctttcgggcggcaacctg
cgtctggtggtgtcgatcgcgaagaagtaccgcaaccgcggcctgtcgttcctcgacctc
atccaggaaggcaacgccggcctgatgcgcggcgtcgagaagtacgagtaccgccgcggc
tacaagttctcgacctacgcaacgtggtggatccgtcaggcgatcacccgcgccgtcgcc
gaccatgcccgcaccatccgcatcccggtgcacatgttccagagcatctcgaccctgaag
gcgaagagcgaagagatccgtcagaagaccggccgcgaaccgacgacggaagaactcgcc
gccgccgtgggcctctcggtcgaagagaccgagcggatcatgaagacctggaagcatccg
atttcgctcgacactcccgtcggcgaaagcgaagactccagctacggcgacttcctggaa
gacaccacggaaaacacgccggccgacagcgcgatgcaccagatgcttcgcgacaagatc
aaccacgtgctgaagagcctcacctaccgcgagcgcgagatcatcaagctgcgttacggc
ctgggcgacggctacagctatacgctggaagagacgggccgcatcttcaaggtgacccgc
gaacgtatccgccagatcgaatcaaaggccctccgcaagctgcagcagcagactcgcgcg
acgcacctcaaggggttcgtcgaatcgatcctgacgtccgaagggggcgcggtgatcgtc
gaggaatcggaagagctgagcgtggtctga
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