Caulifigura coniformis: Pan44_08790
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Entry
Pan44_08790 CDS
T09806
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
ccos
Caulifigura coniformis
Brite
KEGG Orthology (KO) [BR:
ccos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccos03019
]
Pan44_08790 (yhaM)
Messenger RNA biogenesis [BR:
ccos03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Pan44_08790 (yhaM)
BRITE hierarchy
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GFIT
Motif
Pfam:
HD
tRNA_anti-codon
tRNA_anti_2
TraI_2
Cas3_HD
DUF3319
Motif
Other DBs
NCBI-ProteinID:
QDT52866
UniProt:
A0A517S9V5
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All DBs
Position
1070397..1071428
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AA seq
343 aa
AA seq
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MGAGARVAGGATFDSRWLMPRQYVNTLTDGTPVDEIFLLVDKQLRANRNADLYLLAQLRD
KTGQVSGLLWNVSEDSVGHIRQGDYVKVRGKVQVFQGNLQLILRDIDHVPDAAVDPKEFE
MESTVNSDRLLPRLQELIDSISPPPLREVLQSFIDDTELRPLLLKAPAGIRLHHAYHGGL
LEHIVSLMEVASRISDLYPRVDFNLVLAGVFLHDIGKVRELGFETTFLYTDEGQLLGHLS
IGVEMLTEKIRAWEDRKGESFPEEIALRLKHMILSHHGSHDFGSPKLPMTPEAVVLHYLD
TLDAKVHEFVALIDSDPNSQSSWTPFQSSIQRKVFKGVVPGRT
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcaggggcgcgtgttgccggcggagcgactttcgattcccgctggctgatgccc
aggcaatacgtcaatacactcacggacggcacccccgtcgacgaaatctttctcctcgtc
gataagcagctgcgcgccaaccgcaacgccgatctgtatctgctggcgcagctgcgggac
aaaacagggcaggtcagcggactcctctggaacgtgtccgaagattcggtcgggcacatc
cgccagggcgactacgtcaaggtccgcggaaaagtgcaggtcttccagggcaacctgcag
ttgatcctccgggacatcgaccatgtccccgacgccgccgtcgaccccaaggaattcgaa
atggagtcgacggtcaattccgatcgcctcctccccaggctgcaggagttgatcgactcc
atctcaccgccgcccctccgggaagtcctccagtcattcattgacgacaccgagcttcgg
ccgctgctcctcaaggcgcccgccggcatccgcctgcaccacgcctatcacggcggtctg
ctcgagcacatcgtcagcctgatggaagtcgcctctcgcatcagcgacctctatccccgc
gtcgacttcaacctcgttctcgccggcgtctttctgcacgacatcggcaaggtccgtgaa
ctcggattcgaaaccaccttcctgtacaccgacgaagggcagctgctcgggcacctctcc
atcggcgtcgaaatgctgacggagaaaatccgggcctgggaagaccgcaagggagagagc
ttccccgaagaaatcgccctgcgcctcaaacacatgattctcagccatcacggcagtcat
gacttcggaagcccgaagcttccgatgactcccgaagccgtggtgctgcactatctcgac
acgctcgacgccaaggtgcacgagttcgtcgccctcatcgacagcgatcccaattcgcag
tccagctggaccccgttccagtcgagtattcagcggaaggtgtttaaaggagttgttccg
ggccgaacctga
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