Caulifigura coniformis: Pan44_15590
Help
Entry
Pan44_15590 CDS
T09806
Symbol
gyrB_1
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ccos
Caulifigura coniformis
Brite
KEGG Orthology (KO) [BR:
ccos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccos03032
]
Pan44_15590 (gyrB_1)
03400 DNA repair and recombination proteins [BR:
ccos03400
]
Pan44_15590 (gyrB_1)
Enzymes [BR:
ccos01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Pan44_15590 (gyrB_1)
DNA replication proteins [BR:
ccos03032
]
Prokaryotic type
DNA Topoisomerases
Pan44_15590 (gyrB_1)
DNA repair and recombination proteins [BR:
ccos03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Pan44_15590 (gyrB_1)
BRITE hierarchy
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
HATPase_c_3
GyrB_hook
TPD
SURF4
Motif
Other DBs
NCBI-ProteinID:
QDT53537
UniProt:
A0A517SBM0
LinkDB
All DBs
Position
complement(1929902..1931824)
Genome browser
AA seq
640 aa
AA seq
DB search
MAVAESKKSYTAEDIEVLEGLEPVRKRPSMYIGGTDARGLHHLIWEIVDNSVDEYLAGEC
DRIEVQLHKDLASMTVTDNGRGIPVDIHPKTKKSALETILTTLHAGGKFSNKNYARSGGL
HGVGSSVVTALSEELVATVHRDGNEWQQRFKRGKPTTPVKNLRPFRGHGTSIFFRPDPEI
FRRVQFHADTIRQHLEDISYVHGGLTILFADDSKNEKVELHHPEGIKTYLERIIVDDKRK
AVHDLLFACEKEEDKIRVEAVLKWTESTDEHLRSYVNGIRTRAGGTHESGLRSAVAKAVK
NYMDVHEIKQKGLDITPDDIREGIVSIVSVFHPEPMFQGQTKDRLNNPEMGPWVEGMVRP
ALESFLNNNRSIADGVLGRIILAARARQASRDAQAEVRRKTPGSKKSNLPGKLLDCRESN
PDETELFIVEGQSAGGTAASGRDSRIQAVLPLKGKILNTEGLTTGKIIANQEIKDLVDTL
GCGIGPSFDPHKLRYGKIILLMDADSDGYHISTLLLTFFFRHMRELIQLGKVFIGQPPLY
KIEVGKQRFYARDEAAKEEVLASLGERRSFDVQRFKGLGEMNADQLKETTLSPANRVLLQ
VDIDSMVEADKVFAQLLGKDASERYRIIMDEAAEADDLDL
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcgctgaatcgaagaagagttacaccgccgaggacatcgaagttctggagggg
ctggagcccgtccggaagcggccgtcgatgtacatcggagggacggacgcccgcggactg
catcacctgatctgggaaatcgtcgacaactcggtcgacgaataccttgccggcgaatgc
gaccggatcgaggtccagcttcacaaggacctcgcgtcgatgacggtgacggataacggc
cgcgggattccggtcgacattcaccccaagacgaagaagtcggccctggagacgatcctg
accacgctgcacgcgggggggaagttctcgaacaagaactacgcccgcagcggcggtctg
catggcgtgggctcgtcggtggtgacggcgctgtctgaagaactagtggcgacggttcac
cgtgacggcaacgagtggcagcagcggttcaagcgaggaaagccgacgacgccggtcaag
aacctgcgtccgttccggggacacgggacgagcatcttcttccggccggacccggaaatc
ttccggcgcgtgcagttccacgcggacacgatccggcagcatctggaggacatctcctat
gttcacggcggcctgacgatcctgttcgccgacgactcgaagaacgagaaggtcgagctg
caccatcccgaagggatcaaaacgtacctcgaacggatcatcgttgacgacaagcggaaa
gcggtgcatgacctgctgttcgcctgcgaaaaggaagaggacaagatccgcgtcgaagcg
gtcctcaagtggaccgaatcgaccgacgagcacctgcggagctacgtgaacggcatccgt
acacgggcaggggggacgcatgagtcgggcctgcgttcggccgtggcgaaggccgtcaag
aactacatggacgtgcacgagatcaagcagaaggggctcgacatcacgccggacgacatc
cgcgaggggatcgtttcgatcgtgtcggtgttccatccggagccgatgttccaggggcag
acgaaggaccgcctgaacaacccggaaatgggtccgtgggtggaaggcatggtccgcccg
gcgctggagtcgttcctcaacaacaaccgctcgatcgccgacggggtgctgggacggatc
atcctcgcggcccgggcccgccaggcgagccgcgacgcccaggccgaagtgcgccgcaag
acgccgggttcgaagaagagcaacctccccgggaagctgcttgactgccgcgagagcaat
cccgacgagaccgagctgttcatcgtggaaggacagtcggccggcggtacggcggcgagc
ggtcgcgattcacgaatccaggcggtgctgccgctgaaagggaagatcctgaacaccgaa
ggactgaccacggggaagatcatcgccaaccaggagatcaaggacctggtcgacacgctc
ggctgcggaatcggcccgagctttgatccgcacaagctgcggtatgggaagatcatcctg
ctgatggacgccgacagcgacggctaccacatcagcacgctgctgctcacattctttttc
cgacatatgcgggagctgatccagctgggaaaagtcttcatcggccagccgccgctgtac
aagatcgaagtcggcaagcagcggttctatgcccgcgatgaagcggccaaggaagaagtg
ctcgcgagcctcggcgaacgtcgttccttcgacgtgcagcggttcaaagggctgggcgag
atgaacgccgaccagctgaaggaaacgacgctgagcccggcgaaccgggtgcttctgcag
gtcgacatcgacagcatggtggaagcggacaaggtgttcgcgcagctgctcggaaaggat
gcttcagagcgataccggatcatcatggacgaagcggcggaagcggacgacctggatctc
tag
DBGET
integrated database retrieval system
