Caulifigura coniformis: Pan44_33960
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Entry
Pan44_33960 CDS
T09806
Symbol
spoVD
Name
(GenBank) Stage V sporulation protein D
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
ccos
Caulifigura coniformis
Pathway
ccos00550
Peptidoglycan biosynthesis
ccos01100
Metabolic pathways
ccos01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ccos00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Pan44_33960 (spoVD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Pan44_33960 (spoVD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ccos01011
]
Pan44_33960 (spoVD)
Enzymes [BR:
ccos01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Pan44_33960 (spoVD)
Peptidoglycan biosynthesis and degradation proteins [BR:
ccos01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Pan44_33960 (spoVD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QDT55353
UniProt:
A0A517SGV0
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All DBs
Position
4102461..4104647
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AA seq
728 aa
AA seq
DB search
MSHRPALHWKLQAPVRGNAPASRIRLLALGFGVMLVVVVGRVAHLQGVVADRFVVQWDET
STVLEPIPASHGRIVSSDGVVLAFDRTRFDLSVHYRWLEEPPSARWLSQQARQRLAPRDR
RDREKLKQAEVEVLAAREQLWSALAHLTSTSPETLQARRGEIQQRVARMVQSVENRRQAA
SGDEVAASEPSASEPLSVDRVWKTIVAELTTPPQREKQDPLVLREELQVHPILSDLPLAT
AAAIESAPTTFPPGVVTIQRRHERIYPGKDLASHVIGVRRSYRPGEHALAKGGEGGVEQA
YDAVLRGQDGVRRVVYNRRRDVIDSAVVRPPVEGRDVTLSIVANVQRTAESILEAALASP
RKAEAAPSDSSAGEPSATLPRGGTIVAVDVATGDLVAAACAPRFDLNLFNEFDAERWNAL
VSDPRRPFYPRITAMTAPPGSVFKVLTAVAALEEEIIQPESQIHCRGYLNRPDQLRCMIF
RNHGLNHGDVNVSDALCQSCNVFFFEAARKMGDAPLRRWSERFGFGAPTGADLPGEQGGR
LPKEPTGGRRTRDTGSTLQLAIGQSSLLVSPLQVARMMAAIANGGILVSPRFAHVAPLEK
AASGIQLASFESFETPPASSKLDLSPRTIAVVRESLERVVEDPLGTGRAAAVAGVRVAGK
TGTAETGGGQPDHAWFAGYAPADRPRIAFVVMLEHAGSGGNTAGPVARQFVEGLVANGLI
RAEDRTRD
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaccgccctgctcttcactggaaactccaggcgcccgtgaggggcaacgcgccc
gcgtcacggatccggctgctcgcgctgggcttcggcgtgatgctcgttgttgttgtcggc
cgcgtggcgcatctgcagggagttgtggcggatcgcttcgtggttcagtgggatgaaacg
tcgacggtgctcgagccaatccccgcgagccacggacgcatcgtgtcgtccgatggcgtc
gtgctggcgttcgatcggacacggttcgatctgtcggtccactatcggtggctggaagag
ccgccgagtgcgcgctggctcagccagcaggcgcgtcaacgcctcgcgccgcgcgatcgc
cgcgaccgcgaaaagctgaaacaggccgaggtagaagtgctcgcggcccgcgaacaactc
tggagtgcgctggcccacctgacgtcgacaagccctgagactctccaggcacgacgtggt
gagattcagcagcgcgtcgcgcgaatggttcaaagcgtcgagaaccgccgccaggcggcc
tccggcgacgaagtggcggcgagcgagccctctgccagcgagccgctctcggtcgaccgg
gtctggaagacgatcgtcgccgaactgacgactccgccgcagcgagaaaagcaggatccg
ctggtcctgagagaagaactccaggttcatccgatcctgagcgaccttcctctcgcgacc
gcagccgccattgaatcggctccgacgacctttccgccgggcgtggtgacgatccagcga
cgtcacgagcggatctatcccgggaaggacctggcgtcgcacgtcatcggtgtccgccgc
tcgtaccgcccgggtgagcatgctctggccaagggaggcgaaggaggtgtcgagcaggcc
tacgacgcggtgctgcgcggccaggatggagtgcgccgggtggtctataaccgccgccgc
gatgtgatcgattcggcggttgtccggccgccggttgaggggcgtgacgtcaccctctcg
atcgtggcgaacgtccagcgcaccgcagagtcgattctcgaggcggcactcgcgtcgccg
cgcaaagcagaggctgcgccgtccgattcctcggccggcgagccctcagcgactcttccg
cgagggggaacgatcgtcgctgtggacgtggcgacaggcgacctcgtggccgcggcctgc
gcaccccggtttgacctgaacctgttcaatgagttcgacgcggagcgctggaatgcgctg
gtcagcgatccgcgccggccgttctatccgcgcattacggcgatgaccgctccccccggc
tcggtcttcaaagtgttgacggccgtcgcggcgctggaggaagagatcattcagccggag
tcgcagattcactgtcggggttatctgaatcgcccggaccagctccgctgcatgattttc
cgtaatcacggtctgaaccacggcgacgtcaacgtctccgacgcactctgccagtcgtgc
aacgtgttcttttttgaagccgcgcggaagatgggggatgcgccgctgcggcgatggagt
gagcgattcgggtttggcgccccaacgggggccgacctgccgggagaacagggcggccgg
ttgccgaaggaaccgacaggcggacgccggacgcgtgacacgggctcgacgctccagctg
gccatcggccagtcgtcactgctcgtctcgccgctgcaggttgcgcggatgatggcggcg
atcgccaatggcggcatcctggtttcgccccggtttgcgcacgtggccccgctggagaag
gctgccagcggcattcaactcgcgagtttcgagtccttcgaaacgccgccggcgtcttcg
aagctcgacctctcgccgcggacgatcgcagtggtgcgggagtcgctggaacgggtcgtt
gaagatccgctggggacgggccgggctgcggcggtggcgggcgtgcgagtcgcggggaag
actgggactgcggaaaccgggggcgggcagcccgatcatgcgtggtttgcggggtacgct
ccggcggatcggccgcggattgcgttcgtggtgatgctggagcacgcgggctcgggcggg
aacaccgcggggccggtcgcccggcagtttgtggaagggcttgtcgccaacggactgatc
cgggcggaggaccgaacgcgcgattga
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